Publications of the Max Planck Institute of Biophysics 1947 – present

Max Planck Institute of Biophysics

Journal Article (3192)

2017

Journal Article

Shevchenko, V.; Mager, T.; Kovalev, K.; Polovinkin, V.; Alekseev, A.; Juettner, J.; Chizhov, I.; Bamann, C.; Vavourakis, C.; Ghai, R. et al.; Gushchin, I.; Borshchevskiy, V.; Rogachev, A.; Melnikov, I.; Popov, A.; Balandin, T.; Rodriguez-Valera, F.; Manstein, D. J.; Bueldt, G.; Bamberg, E.; Gordeliy, V.: Inward H⁺ pump xenorhodopsin: Mechanism and alternative optogenetic approach. Science Advances 3 (9), e1603187 (2017)

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Sommer, M.; Xie, H.; Michel, H.: Pseudomonas stutzeri as an alternative host for membrane proteins. Microbial Cell Factories 16, 157 (2017)

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Henrich, E.; Sörmann, J.; Eberhardt, P.; Peetz, O.; Mezhyrova, J.; Morgner, N.; Fendler, K.; Dötsch, V.; Wachtveitl, J.; Bernhard, F. et al.; Bamann, C.: From Gene to Function: Cell-Free Electrophysiological and Optical Analysis of Ion Pumps in Nanodiscs. Biophysical Journal 113 (6), pp. 1331 - 1341 (2017)

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Sharma, V.; Belevich, G.; Gamiz-Hernandez, A. P.; Róg, T.; Vattulainen, I.; Verkhovskaya, M. L.; Wikström, M.; Hummer, G.; Kaila, V. R.I.: Redox-induced activation of the proton pump in the respiratory complex I. Proceedings of the National Academy of Sciences of the United States of America 112 (37), pp. 11571 - 11576 (2017)

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Weinert, T.; Olieric, N.; Cheng, R.; Brünle, S.; James, D.; Ozerov, D.; Gashi, D.; Vera, L.; Marsh, M.; Jaeger, K. et al.; Dworkowski, F.; Panepucci, E.; Basu, S.; Skopintsev, P.; Dorè, A. S.; Geng, T.; Cooke, R. M.; Liang, M.; Prota, A. E.; Paneels, V.; Nogly, P.; Ermler, U.; Schertler, G.; Hennig, M.; Steinmetz, M. O.; Wang, M.; Standfuss, J.: Serial millisecond crystallography for routine room-temperature structure determination at synchrotrons. Nature Communications 8, 542 (2017)

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Stelzl, L. S.; Erlenbach, N.; Heinz, M.; Prisner, T. F.; Hummer, G.: Resolving the Conformational Dynamics of DNA with Ångstrom Resolution by Pulsed Electron–Electron Double Resonance and Molecular Dynamics. Journal of the American Chemical Society 139 (34), pp. 11674 - 11677 (2017)

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Bai, L.; Wagner, T.; Xu, T.; Hu, X.; Ermler, U.; Shima, S.: A Water-Bridged H-Bonding Network Contributes to the Catalysis of the SAM-Dependent C-Methyltransferase HcgC. Angewandte Chemie, International Edition in English 56 (36), pp. 10806 - 10809 (2017)

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Wagner, T.; Koch, J.; Ermler, U.; Shima, S.: Methanogenic heterodisulfide reductase (HdrABC-MvhAGD) uses two noncubane [4Fe-4S] clusters for reduction. Science 357 (6352), pp. 699 - 703 (2017)

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Halbleib, K.; Pesek, K.; Covino, R.; Hofbauer, H. F.; Wunnicke, D.; Hänelt, I.; Hummer, G.; Ernst, R.: Activation of the Unfolded Protein Response by Lipid Bilayer Stress. Molecular Cell 67 (4), pp. 673 - 684 (2017)

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Bausewein, T.; Mills, D. J.; Langer, J. D.; Nitschke, B.; Nussberger, S.; Kühlbrandt, W.: Cryo-EM Structure of the TOM Core Complex from Neurospora crassa. Cell 170 (4), pp. 693 - 700 (2017)

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Stelzl, L. S.; Hummer, G.: Kinetics from Replica Exchange Molecular Dynamics Simulations. Journal of Chemical Theory and Computation 13 (8), pp. 3927 - 3935 (2017)

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Patiño-Ruiz, M.; Ganea, C.; Fendler, K.; Călinescu, O.: Competition is the basis of the transport mechanism of the NhaB Na⁺/H⁺ exchanger from Klebsiella pneumoniae. PLoS One 12 (7), e0182293 (2017)

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Hau, A.-C.; Grebbin, B. M.; Agoston, Z.; Anders-Maurer, M.; Müller, T.; Groß, A.; Kolb, J.; Langer, J. D.; Döring, C.; Schulte, D.: MEIS homeodomain proteins facilitate PARP1/ARTD1-mediated eviction of histone H1. The Journal of Cell Biology: JCB 216 (9), pp. 2715 - 2729 (2017)

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Brandt, T.; Mourier, A.; Tain, L. S.; Partridge, L.; Larsson, N.-G.; Kühlbrandt, W.: Changes of mitochondrial ultrastructure and function during ageing in mice and Drosophila. eLife 6, e24662 (2017)

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Chiavazzo, E.; Covino, R.; Coifman, R. R.; Gear, C. W.; Georgiou, A. S.; Hummer, G.; Kevrekidis, I. G.: Intrinsic map dynamics exploration for uncharted effective free-energy landscapes. Proceedings of the National Academy of Sciences of the United States of America 114 (28), pp. E5494 - E5503 (2017)

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Daum, B.; Vonck, J.; Bellack, A.; Chaudhury, P.; Reichelt, R.; Albers, S.-V.; Rachel, R.; Kühlbrandt, W.: Structure and in situ organisation of the Pyrococcus furiosus archaellum machinery. eLife 6, e27470 (2017)

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Bai, L.; Fujishiro, T.; Huang, G.; Koch , J.; Takabayashi, A.; Yokono , M.; Tanaka , A.; Xu, T.; Hu , X.; Ermler, U. et al.; Shima , S.: Towards artificial methanogenesis: biosynthesis of the [Fe]-hydrogenase cofactor and characterization of the semi-synthetic hydrogenase. Faraday Discussions 198 (37), pp. 37 - 58 (2017)

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Călinescu, O.; Dwivedi, M.; Patiño-Ruiz, M.; Padan, E.; Fendler, K.: Lysine 300 is essential for stability but not for electrogenic transport of the Escherichia coli NhaA Na⁺/H⁺ antiporter. The Journal of Biological Chemistry 292 (19), pp. 7932 - 7941 (2017)

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Urmann, D.; Lorenz, C.; Linker, S. M.; Braun, M.; Wachtveitl, J.; Bamann, C.: Photochemical Properties of the Red-shifted Channelrhodopsin Chrimson. Photochemistry and Photobiology 93 (3), pp. 782 - 795 (2017)

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Malinverni, D.; Jost-Lopez, A.; De Los Rios, P.; Hummer, G.; Barducci, A.: Modeling Hsp70/Hsp40 interaction by multi-scale molecular simulations and coevolutionary sequence analysis. eLife 6, e23471 (2017)

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Ghysels, A.; Venables, R. M.; Pastor, R. W.; Hummer, G.: Position-Dependent Diffusion Tensors in Anisotropic Media from Simulation: Oxygen Transport in and through Membranes. Journal of Chemical Theory and Computation 13 (6), pp. 2962 - 2976 (2017)

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Reichel, K.; Fisette, O.; Braun, T.; Lange, O.; Hummer, G.; Schäfer, L. V.: Systematic evaluation of CS‐Rosetta for membrane protein structure prediction with sparse NOE restraints. Proteins: Structure, Function, and Bioinformatics 85 (5), pp. 812 - 826 (2017)

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Hummer, G.; Szabo, A.: Dynamics of the Orientational Factor in Fluorescence Resonance Energy Transfer. The Journal of Physical Chemistry B 121 (15), pp. 3331 - 3339 (2017)

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Karathanasis, C.; Frick, F.; Hummer, G.; Heilemann, M.: Molecule Counts in Localization Microscopy with Organic Fluorophores. ChemPhysChem 18 (8), pp. 942 - 948 (2017)

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Mager, T.; Wood, P. G.; Bamberg, E.: Optogenetic Control of Ca²⁺ and Voltage-Dependent Large Conductance (BK) Potassium Channels. Journal of Molecular Biology (London) 429 (6), pp. 911 - 921 (2017)

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van Pee, K.; Neuhaus, A.; D'Imprima, E.; Mills, D. J.; Kühlbrandt, W.; Yildiz, Ö.: CryoEM structures of membrane pore and prepore complex reveal cytolytic mechanism of Pneumolysin. eLife 6, e23644 (2017)

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Kohlstädt, M.; Buschmann, S.; Langer, J. D.; Xie, H.; Michel, H.: Subunit CcoQ is involved in the assembly of the Cbb₃-type cytochrome c oxidases from Pseudomonas stutzeri ZoBell but not required for their activity. Biochimica et Biophysica Acta, Bioenergetics 1858 (3), pp. 231 - 238 (2017)

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Bhaskara, R.; Linker, S. M.; Vögele, M.; Köfinger, J.; Hummer, G.: Carbon Nanotubes Mediate Fusion of Lipid Vesicles. ACS Nano 11 (2), pp. 1273 - 1280 (2017)

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Simonson, T.; Hummer, G.; Roux, B.: Equivalence of M- and P-Summation in Calculations of Ionic Solvation Free Energies. The Journal of Physical Chemistry A 121 (7), pp. 1525 - 1530 (2017)

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Schwierz, N.; Frost, C. V.; Geissler, P. L.; Zacharias, M.: From Aβ Filament to Fibril: Molecular Mechanism of Surface-Activated Secondary Nucleation from All-Atom MD Simulations. The Journal of Physical Chemistry B 121 (4), pp. 671 - 682 (2017)

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Castaño-Díez, D.; Kudryashev, M.; Stahlberg, H.: Dynamo Catalogue: Geometrical tools and data management for particle picking in subtomogram averaging of cryo-electron tomograms. Journal of Structural Biology 197 (2), pp. 135 - 144 (2017)

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Rathmann, B.; Quirnheim Pais, D.; Thielmann, Y.: MPI tray: a versatile crystallization plate for membrane proteins. Journal of Applied Crystallography 50 (1), pp. 327 - 330 (2017)

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Nöll, A.; Christoph, T.; Herbring, V.; Zollmann, T.; Barth, K.; Mehdipour, A. R.; Tomasiak, T. M.; Brüchert, S.; Joseph, B.; Abele, R. et al.; Oliéric, V.; Wang, M.; Diederichs, K.; Hummer, G.; Stroud, R. M.; Pos, K. M.; Tampé, R.: Crystal structure and mechanistic basis of a functional homolog of the antigen transporter TAP. Proceedings of the National Academy of Sciences of the United States of America 114 (4), pp. E438 - E447 (2017)

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Konjik, V.; Brünle, S.; Demmer, U.; Vanselow, A.; Sandhoff, R.; Ermler, U.; Mack, M.: The Crystal Structure of RosB: Insights into the Reaction Mechanism of the First Member of a Family of Flavodoxin-like Enzymes. Angewandte Chemie, International Edition in English 56 (4), pp. 1146 - 1151 (2017)

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Weidenweber, S.; Schühle, K.; Demmer, U.; Warkentin, E.; Ermler, U.; Heider, J.: Structure of the acetophenone carboxylase core complex: prototype of a new class of ATP-dependent carboxylases/hydrolases. Scientific Reports 7, 39674 (2017)

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Lam, R. S.; Töpfer, F.; Wood, P. G.; Busskamp, V.; Bamberg, E.: Functional Maturation of Human Stem Cell-Derived Neurons in Long-Term Cultures. PLoS One 12 (1), e0169506 (2017)

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Blees, A.; Januliene, D.; Hofmann, T.; Koller, N.; Schmidt, C.; Trowitzsch, S.; Moeller, A.; Tampe, R.: Structure of the human MHC-I peptide-loading complex. Nature 551, pp. 525 - 528 (2017)

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Christiansen, S. H.; Murphy, R. A.; Juul-Madsen, K.; Fredborg, M.; Hvam, M. L.; Axelgaard, E.; Skovdal, S. M.; Meyer, R. L.; Sørensen, U. B. S.; Möller, A. et al.; Nyengaard, J. R.; Nørskov-Lauritsen, N.; Wang, M.; Gadjeva, M.; Howard, K. A.; Davies, J. C.; Petersen, E.; Vorup-Jensen, T.: The Immunomodulatory Drug Glatiramer Acetate is Also an Effective Antimicrobial Agent that Kills Gram-negative Bacteria. Scientific Reports 7, 15653, pp. 1 - 16 (2017)

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Cossio, P.; Rohr, D.; Baruffa, F.; Rampp, M.; Lindenstruth, V.; Hummer, G.: BioEM: GPU-accelerated computing of Bayesian inference of electron microscopy images. Computer Physics Communications 210 (01), pp. 163 - 171 (2017)

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Diskowski, M.; Mehdipour, A. R.; Wunnicke, D.; Mills, D. J.; Mikusevic, V.; Bärland, N.; Hoffmann, J.; Morgner, N.; Steinhoff, H.-J.; Hummer, G.: Helical jackknives control the gates of the double-pore K⁺ uptake system KtrABs. eLife, pp. 1 - 21 (2017)

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Gold, V. A. M.; Chroscicki, P.; Bragoszewski, P.; Chacinska, A.: Visualization of cytosolic ribosomes on the surface of mitochondria by electron cryo‐tomography. EMBO Reports 18, pp. 1786 - 1800 (2017)

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He, C.; Preiss, L.; Wang, B.; Fu, L.; Wen, H.; Zhang, X.; Cui, H.; Meier, T.; Yin, D.: Structural Simplification of Bedaquiline: the Discovery of 3-(4-(N,N-Dimethylaminomethyl)phenyl)quinoline-Derived Antitubercular Lead Compounds. ChemMedChem 12, pp. 106 - 119 (2017)

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Januliene, D.; Andersen, J. L.; Nielsen, J. A.; Quistgaard, E. M.; Hansen, M.; Strandbygaard, D.; Moeller, A.; Petersen, C. M.; Madsen, P.; Thirup, S. S.: Acidic Environment Induces Dimerization and Ligand Binding Site Collapse in the Vps10p Domain of Sortilin. Structure 25 (12), pp. 1809 - 1819 (2017)

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Januliene, D.; Manavalan, A.; Ovesen, P. L.; Pedersen, K.-M.; Thirup, S.; Nykjær, A.; Moeller, A.: Hidden Twins: SorCS Neuroreceptors Form Stable Dimers. Journal of Molecular Biology (London) 429 (19), pp. 2907 - 2917 (2017)

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Kohler, R.; Mooney, R. A.; Mills, D. J.; Landick, R.; Cramer, P.: Architecture of a transcribing-translating expressome. Science 356, pp. 194 - 197 (2017)

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López-Alonso, J. P.; Kaminishi, T.; Kikuchi, T.; Hirata, Y.; Iturrioz, I.; Dhimole, N.; Schedlbauer, A.; Hase, Y.; Goto, S.; Kurita, D. et al.; Muto, A.; Zhou, S.; Naoe, C.; Mills, D. J.; Gil-Carton, D.; Takemoto, C.; Himeno, H.; Fucini, P.; Connell, S. R.: RsgA couples the maturation state of the 30S ribosomal decoding center to activation of its GTPase pocket. Nucleic Acids Research 45 (11), pp. 6945 - 6959 (2017)

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Mühleip, A. W.; Dewar, C. E.; Schnaufer, A.; Kühlbrandt, W.; Davies, K. M.: In situ structure of trypanosomal ATP synthase dimer reveals a unique arrangement of catalytic subunits. Proceedings of the National Academy of Sciences of the United States of America 114 (5), pp. 992 - 997 (2017)

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Nürnberger, P.; Reinhardt, H. M.; Rhinow, D.; Riedel , R.; Werner, S.; Hampp, N. A.: Controlled growth of periodically aligned copper-silicide nanocrystal arrays on silicon directed by laser-induced periodic surface structures (LIPSS). Applied Surface Science 420, pp. 70 - 76 (2017)

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Payer, S. E.; Marshall, S. A.; Bärland, N.; Sheng, X.; Reiter, T.; Dordic, A.; Steinkellner, G.; Wuensch, C.; Kaltwasser, S.; Fisher, K. et al.; Rigby, S. E. J.; Macheroux, P.; Vonck, J.; Gruber, K.; Faber, K.; Himo, F.; Leys, D.; Pavkov-Keller, T.; Glueck, S. M.: Regioselective para-Carboxylation of Catechols with a Prenylated Flavin Dependent Decarboxylase. Angewandte Chemie, International Edition in English 56 (44), pp. 13893 - 13897 (2017)

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Retel, J. S.; Nieuwkoop, A. J.; Hiller, M.; Higman, V. A.; Barbet-Massin, E.; Stanek, J.; Andreas, L. B.; Franks, W. T.; van Rossum, B.-J.; Vinothkumar, K. R. et al.; Handel, L.; de Palma, G. G.; Bardiaux, B.; Pintacuda, G.; Emsley, L.; Kühlbrandt, W.; Oschkinat, H.: Structure of outer membrane protein G in lipid bilayers. Nature Communications 8, 2073, p. 1 (2017)

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Scherr, J.; Parey, K.; Klusch, N.; Murphy, B. J.; Balser, S.; Neuhaus, A.; Zickermann, V.; Kühlbrandt, W.; Terfort, A.; Rhinow, D.: Self-Perforated Hydrogel Nanomembranes Facilitate Structural Analysis of Proteins by Electron Cryo-Microscopy. ACS Nano 11 (6), pp. 6467 - 6473 (2017)

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Schulz, S.; Wilkes, M.; Mills, D. J.; Kühlbrandt, W.; Meier, T.: Molecular architecture of the N‐type ATPase rotor ring from Burkholderia pseudomallei. EMBO Reports 18 (6), pp. 1 - 10 (2017)

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Schumacher, D.; Bergeler, S.; Harms, A.; Vonck, J.; Huneke-Vogt, S.; Frey, E.; Søgaard-Andersen, L.: The PomXYZ Proteins Self-Organize on the Bacterial Nucleoid to Stimulate Cell Division. Developmental Cell 41, pp. 299 - 314 (2017)

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Vonck, J.; Mills, D. J.: Advances in high-resolution cryo-EM of oligomeric enzymes. Current Opinion in Structural Biology 46, pp. 48 - 54 (2017)

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Weston, C. E.; Krämer, A.; Colin, F.; Yildiz, Ö.; Baud, M. G. J.; Meyer-Almes, F.-J.; Fuchter, M. J.: Toward Photopharmacological Antimicrobial Chemotherapy Using Photoswitchable Amidohydrolase Inhibitors. ACS Infect. Dis. 3 (2), pp. 152 - 161 (2017)

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Wilkes, M.; Madej, G. M.; Kreuter, L.; Rhinow, D.; Heinz, V.; De Sanctis, S.; Ruppel, S.; Richter, R. M.; Joos, F.; Grieben, M. et al.; Pike, A. C. W.; Huiskonen, J. T.; Carpenter, E. P.; Kühlbrandt, W.; Witzgall, R.: Molecular insights into lipid-assisted Ca²⁺ regulation of the TRP channel Polycystin-2. Nature Structural and Molecular Biology 24 (2), pp. 123 - 130 (2017)

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2016

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Călinescu, O.; Linder, M.; Wöhlert, D.; Yildiz, Ö.; Kühlbrandt, W.; Fendler, K.: Electrogenic Cation Binding in the Electroneutral Na⁺/H⁺ Antiporter of Pyrococcus abyssi. The Journal of Biological Chemistry 291 (52), pp. 26786 - 26793 (2016)

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Krämer, A.; Wagner, T.; Yildiz, Ö.; Meyer-Almes, F.-J.: Crystal Structure of a Histone Deacetylase Homologue from Pseudomonas aeruginosa. Biochemistry 55 (49), pp. 6858 - 6868 (2016)

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Demmer, J. K.; Rupprecht, F. A.; Eisinger, M. L.; Ermler, U.; Langer, J. D.: Ligand binding and conformational dynamics in a flavin-based electron-bifurcating enzyme complex revealed by Hydrogen-Deuterium Exchange Mass Spectrometry. FEBS Letters 590 (24), pp. 4472 - 4479 (2016)

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Sousa, J. S.; Mills, D. J.; Vonck, J.; Kühlbrandt, W.: Functional asymmetry and electron flow in the bovine respirasome. eLife 5, e21290 (2016)

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Hummer, G.; Fricke, F.; Heilemann, M.: Model-independent counting of molecules in single-molecule localization microscopy. Molecular Biology of the Cell 27 (22), pp. 3637 - 3644 (2016)

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Lehnert, E.; Mao, J.; Mehdipour, A. R.; Hummer, G.; Abele, R.; Glaubitz, C.; Tampé, R.: Antigenic Peptide Recognition on the Human ABC Transporter TAP Resolved by DNP-Enhanced Solid-State NMR Spectroscopy. Journal of the American Chemical Society 138 (42), pp. 13967 - 13974 (2016)

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Feldbauer, K.; Schlegel, J.; Weissbecker, J.; Sauer, F.; Wood, P. G.; Bamberg, E.; Terpitz, U.: Optochemokine tandem for light-control of intracellular Ca²⁺. PLoS One 10 (11), e0165344 (2016)

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Schanzenbächer, C.; Sambandan, S.; Langer, J. D.; Schuman, E. M.: Nascent Proteome Remodeling following Homeostatic Scaling at Hippocampal Synapses. Neuron 92 (2), pp. 358 - 371 (2016)

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Wagner , T.; Ermler, U.; Shima, S.: The methanogenic CO₂ reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters. Science Magazine 354 (6308), pp. 114 - 117 (2016)

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Hanus, C.; Geptin, H.; Tushev, G.; Garg, S.; Alvarez-Castelao, B.; Sambandan, S.; Kochen, L.; Hafner, A.-S.; Langer, J. D.; Schuman, E. M.: Unconventional secretory processing diversifies neuronal ion channel properties. eLife 5, e20609 (2016)

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Yihua, S.; Zhang, C.; Dingji, S.; Xiaohui, J.; Rui, J.; Peimin, H.: Effects of light quality on cell growth and psbA promoter of engineered Synechococcus sp. PCC7002. Chinese Journal of Biotechnology 32 (9), pp. 1286 - 1290 (2016)

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Klapper, S. D.; Swiersy, A.; Bamberg, E.; Busskamp, V.: Biophysical Properties of Optogenetic Tools and Their Application for Vision Restoration Approaches. Frontiers in Systems Neuroscience 10, 74 (2016)

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Upadhyay, V.; Ceh, K.; Tumulka, F.; Abele, R.; Hoffmann , J.; Langer, J. D.; Shima, S.; Ermler, U.: Molecular characterization of methanogenic N⁵-methyltetrahydromethanopterin: Coenzyme M methyltransferase. Biochimica et Biophysica Acta-Biomembranes 1858 (9), pp. 2140 - 2144 (2016)

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Wagner, T.; Kahnt, J.; Ermler, U.; Shima, S.: Didehydroaspartate Modification in Methyl-Coenzyme M Reductase Catalyzing Methane Formation. Angewandte Chemie International Edition in English 55 (36), pp. 10630 - 10633 (2016)

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Vögele, M.; Hummer, G.: Divergent Diffusion Coefficients in Simulations of Fluids and Lipid Membranes. The Journal of Physical Chemistry B 25 (33), pp. 8722 - 8732 (2016)

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Cossio, P.; Hummer, G.; Szabo, A.: Kinetic Ductility and Force-Spike Resistance of Proteins from Single-Molecule Force Spectroscopy. Biophysical Journal 111 (4), pp. 832 - 840 (2016)

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Mehdipour, A. R.; Hummer, G.: Cardiolipin puts the seal on ATP synthase. Proceedings of the National Academy of Sciences of the United States of America 113 (31), pp. 8568 - 8570 (2016)

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Fujishiro, T.; Bai , L.; Xu , T.; Xie , X.; Schick, M.; Kahnt, J.; Rother, M.; Hu , X.; Ermler, U.; Shima, S.: Identification of HcgC as a SAM-Dependent Pyridinol Methyltransferase in [Fe]-Hydrogenase Cofactor Biosynthesis. Angewandte Chemie International Edition in English 55 (33), pp. 9648 - 9651 (2016)

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Vonck, J.; Parcej, D. N.; Mills, D. J.: Structure of Alcohol Oxidase from Pichia pastoris by Cryo-Electron Microscopy. PLOS ONE 11 (7), e0159476 (2016)

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Gupta, S.; Biswas, A.; Akhter, M. S.; Krettler, C.; Reinhart, C.; Dodt, J.; Reuter, A.; Philippou, H.; Ivaskevicius, V.; Oldenburg, J.: Revisiting the mechanism of coagulation factor XIII activation and regulation from a structure/functional perspective. Scientific Reports 6, pp. 1 - 16 (2016)

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Laiyin, N.; Grell, E.; Malviya, V. N.; Xie, H.; Wang, J.; Michel, H.: Identification of the High-affinity Substrate-binding Site of the Multidrug and Toxic Compound Extrusion (MATE) Family Transporter from Pseudomonas stutzeri. The Journal of Biological Chemistry 291 (30), pp. 15503 - 15514 (2016)

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Leahy, C. T.; Murphy, R. D.; Hummer, G.; Rosta, E.; Buchete, N.-V.: Coarse Master Equations for Binding Kinetics of Amyloid Peptide Dimers. The Journal of Physical Chemistry Letters 7 (14), pp. 2676 - 2682 (2016)

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Covino, R.; Ballweg, S.; Stordeur, C.; Michaelis, J. B.; Puth, K.; Wernig, F.; Bahrami, A. H.; Ernst, A. M.; Hummer, G.; Ernst, R.: A Eukaryotic Sensor for Membrane Lipid Saturation. Molecular Cell 63 (1), pp. 49 - 59 (2016)

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Hummer, G.; Wikström, M.: Molecular simulation and modeling of complex I. Biochimica et Biophysica Acta, Bioenergetics 1857 (7), pp. 915 - 921 (2016)

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Wagner, T.; Ermler, U.; Shima, S.: MtrA of the sodium ion pumping methyltransferase binds cobalamin in a unique mode. Scientific Reports 6, 28226 (2016)

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Brandt, T.; Cavellini, L.; Kühlbrandt, W.; Cohen, M. M.: A mitofusin-dependent docking ring complex triggers mitochondrial fusion in vitro. eLife 5, e14618 (2016)

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Bazzone, A.; Madej, G. M.; Kaback, H. R.; Fendler, K.: pH Regulation of Electrogenic Sugar/H⁺ Symport in MFS Sugar Permeases. PLoS One 11 (5), e0156392 (2016)

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Sugawa, M.; Okazaki, K.-i.; Kobayashi, M.; Matsui, T.; Hummer, G.; Masaike, T.; Nishizaka, T.: F₁-ATPase conformational cycle from simultaneous single-molecule FRET and rotation measurements. Proceedings of the National Academy of Sciences of the United States of America 113 (21), pp. E2916 - E2924 (2016)

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Albarracin, V. H.; Kraiselburd, I.; Bamann, C.; Wood, P. G.; Bamberg, E.; Farias, M. E.; Gärtner, W.: Functional Green-Tuned Proteorhodopsin from Modern Stromatolites. PLoS One 11 (5), e0154962 (2016)

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Journal Article

Weidenweber, S.; Marmulla, R.; Ermler, U.; Harder, J.: X-ray structure of linalool dehydratase/isomerase from Castellaniella defragrans reveals enzymatic alkene synthesis. FEBS Letters 590 (9), pp. 1375 - 1383 (2016)

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Safarian, S.; Rajendran, C.; Müller, H.; Preu, J.; Langer, J. D.; Ovchinnikov, S.; Hirose, T.; Kusumoto, T.; Sakamoto, J.; Michel, H.: Structure of a bd oxidase indicates similar mechanisms for membrane-integrated oxygen reductases. Science 352 (6285), pp. 583 - 586 (2016)

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Gushchin, I.; Shevchenko, V.; Polovinkin, V.; Borshchevskiy, V.; Buslaev, P.; Bamberg, E.; Gordeliy, V.: Structure of the light-driven sodium pump KR2 and its implications for optogenetics. The FEBS Journal 283 (7), pp. 1232 - 1238 (2016)

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Jia, X.-H.; Zhang, C.-L.; Shi, D.-J.; Zhuang, M.-M.; Wang, X.; Jia, R.; Zhang, Z.-Y.; Huang, J.; Sun, Y.-H.; Qian, W.-Y. et al.; Peng, G.-H.; He, P.-M.: Oral administration of Anabaena-expressed VP28 for both drug and food against white spot syndrome virus in shrimp. Journal of applied phycology 28 (2), pp. 1001 - 1009 (2016)

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Srinivasan, L.; Baars, T. L.; Fendler, K.; Michel, H.: Functional characterization of solute carrier (SLC) 26/sulfate permease (SulP) proteins in membrane mimetic systems. Biochimica et Biophysica Acta-Biomembranes 1858 (4), pp. 698 - 705 (2016)

MPG.PuRe

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Best, R.; Hummer, G.: Microscopic interpretation of folding ϕ-values using the transition path ensemble. Proceedings of the National Academy of Sciences of the United States of America 113 (12), pp. 3263 - 3268 (2016)

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Boll, M.; Einsle, O.; Ermler, U.; Kroneck, P. M.H.: Structure and Function of the Unusual Tungsten Enzymes Acetylene Hydratase and Class II Benzoyl-Coenzyme A Reductase. Journal of Molecular Microbiology and Biotechnology 26 (1-3), pp. 119 - 137 (2016)

MPG.PuRe

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Boll, M.; Kung, J. W.; Ermler, U.; Martins, B. M.; Buckel, W.: Fermentative Cyclohexane Carboxylate Formation in Syntrophus aciditrophicus. Journal of Molecular Microbiology and Biotechnology 26 (1-3), pp. 165 - 179 (2016)

MPG.PuRe

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Rabus, R.; Boll , M.; Heider, J.; Meckenstock, R. U.; Buckel, W.; Einsle, O.; Ermler, U.; Golding, B. T.; Gunsalus, R. P.; Kroneck, P. M.H. et al.; Krüger, M.; Lueders, T.; Martins, B. M.; Musat, F.; Richnow, H. H.; Schink, B.; Seifert, J.; Szaleniec, M.; Treude, T.; Ullmann, G. M.; Vogt, C.; von Bergen, M.; Wilkes, H.: Anaerobic Microbial Degradation of Hydrocarbons: From Enzymatic Reactions to the Environment. Journal of Molecular Microbiology and Biotechnology 26 (1-3), pp. 5 - 28 (2016)

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Brandt, K.; Müller, D. B.; Hoffmann, J.; Langer, J. D.; Brutschy, B.; Morgner, N.; Müller, V.: Stoichiometry and deletion analyses of subunits in the heterotrimeric F-ATP synthase c ring from the acetogenic bacterium Acetobacterium woodii. The FEBS Journal 283 (3), pp. 510 - 520 (2016)

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Kohlstädt, M.; Buschmann, S.; Xie, H.; Resemann, A.; Warkentin, E.; Langer, J. D.; Michel, H.: Identification and characterization of the novel subunit CcoM in the cbb₃-cytochrome c oxidase from Pseudomonas stutzeri ZoBell. mBio 7 (7), pp. 1 - 9 (2016)

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Joedicke, L.; Trenker, R.; Langer, J. D.; Michel, H.; Preu, J.: Cell-free synthesis of isotopically labelled peptide ligands for the functional characterization of G protein-coupled receptors. FEBS Open Bio 6 (1), pp. 90 - 102 (2016)

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Chaudhury, P.; Neiner, T.; D'Imprima, E.; Banerjee, A.; Reindl, S.; Ghosh, A.; Arvai, A. S.; Mills, D. J.; van der Does, C.; Tainer, J. A. et al.; Vonck, J.; Albers, S.: The nucleotide-dependent interaction of FlaH and FlaI isessential for assembly and function of the archaellum motor. Molecular Microbiology 99 (4), pp. 674 - 685 (2016)

MPG.PuRe

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D'Imprima, E.; Mills, D. J.; Parey, K.; Brandt, U.; Kühlbrandt, W.; Zickermann, V.; Vonck, J.: Cryo-EM structure of respiratory complex I reveals a link to mitochondrial sulfur metabolism. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1857 (12), pp. 1935 - 1942 (2016)

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