Publications of the Ermler Research Group

Publications of the Ermler Research Group

Journal Article (96)

2020
Journal Article
Stella Vitt, Simone Prinz, Nils Hellwig, Nina Morgner, Ulrich Ermler, and Wolfgang Buckel, "Molecular and Low-Resolution Structural Characterization of the Na+-Translocating Glutaconyl-CoA Decarboxylase From Clostridium symbiosum," Frontiers in Microbiology 11, 480 (2020).
Journal Article
Gangfeng Huang, Tristan Wagner, Ulrike Demmer, Eberhard Warkentin, Ulrich Ermler, and Seigo Shima, "The Hydride Transfer Process in NADP-dependent Methylene-tetrahydromethanopterin Dehydrogenase," Journal of Molecular Biology (London) 432 (7), 2042-2054 (2020).
Journal Article
Gangfeng Huang, Tristan Wagner, Ulrich Ermler, and Seigo Shima, "Methanogenesis involves direct hydride transfer from H2 to an organic substrate," Nature Reviews Chemistry 4 (2), 213-221 (2020).
2019
Journal Article
Steffen Brünle, Martin L. Eisinger, Juliane Poppe, Deryck J. Mills, Julian D. Langer, Janet Vonck, and Ulrich Ermler, "Molybdate pumping into the molybdenum storage protein via an ATP-powered piercing mechanism," Proceedings of the National Academy of Sciences of the United States of America 52 (116), 26497-26504 (2019).
Journal Article
Gangfeng Huang, Tristan Wagner, Matthew D. Wodrich, Kenichi Ataka, Eckhard Bill, Ulrich Ermler, Xile Hu, and Seiko Shima, "The atomic-resolution crystal structure of activated [Fe]-hydrogenase," Nature Catalysis 2 (6), 537-543 (2019).
Journal Article
Max Willistein, Dominique F. Bechtel, Christina S. Müller, Ulrike Demmer, Larissa Heimann, Kanwal Kayastha, Volker Schünemann, Antonio J. Pierik, G. Matthias Ullmann, Ulrich Ermler, and Matthias Boll, "Low potential enzymatic hydride transfer via highly cooperative and inversely functionalized flavin cofactorsLow potential enzymatic hydride transfer via highly cooperative and inversely functionalized flavin cofactors," Nature Communications 10, 2074 (2019).
Journal Article
Tomohiro Watanabe, Tristan Wagner, Gangfeng Huang, Jörg Kahnt, Kenichi Ataka, Ulrich Ermler, and Seigo Shima, "The Bacterial [Fe]‐Hydrogenase Paralog HmdII Uses Tetrahydrofolate Derivatives as Substrates," Angewandte Chemie International Edition in English 58 (11), 3506-3510 (2019).
2018
Journal Article
Juliane Poppe, Steffen Brünle, Ron Hail, Katharina Wiesemann, Klaus Schneider, and Ulrich Ermler, "The Molybdenum Storage Protein: A soluble ATP hydrolysis‐dependent molybdate pump," The FEBS Journal 285 (24), 4602-4616 (2018).
Journal Article
Steffen Brünle, Juliane Poppe, Ron Hail, Ulrike Demmer, and Ulrich Ermler, "The molybdenum storage protein - A bionanolab for creating experimentally alterable polyoxomolybdate clusters," Journal of Inorganic Biochemistry 189 (12), 172-179 (2018).
Journal Article
Tristan Wagner , Gangfeng Huang, Ulrich Ermler, and Seigo Shima, "How [Fe]-Hydrogenase from Methanothermobacter is Protected Against Light and Oxidative Stress," Angewandte Chemie International Edition in English 57 (46), 15056-15059 (2018).
Journal Article
Gangfeng Huang, Tristan Wagner, Ulrich Ermler, Eckhard Bill, Kenichi Ataka, and Seiko Shima, "Dioxygen Sensitivity of [Fe]‐Hydrogenase in the Presence of Reducing Substrates," Angewandte Chemie International Edition in English 57 (18), 4917-4920 (2018).
Journal Article
Julius K. Demmer, Johannes Bertsch, Christian Öppinger, Hannah Wohlers, Kanwal Kayastha, Ulrike Demmer, Ulrich Ermler, and Volker Müller, "Molecular basis of the flavin‐based electron‐bifurcating caffeyl‐CoA reductase reaction," FEBS Letters 592 (3), 332-342 (2018).
2017
Journal Article
Julius K. Demmer, Nilanjan Pal Chowdhury, Thorsten Selmer, Ulrich Ermler, and Wolfgang Buckel, "The semiquinone swing in the bifurcating electron transferring flavoprotein/butyryl-CoA dehydrogenase complex from Clostridium difficile," Nature Communications 8, 1577 (2017).
Journal Article
Eberhard Warkentin, Sina Weidenweber, Karola Schühle, Ulrike Demmer, Johann Heider, and Ulrich Ermler, "A rare polyglycine type II-like helix motif in naturally occurring proteins," Proteins: Structure, Function, and Bioinformatics 85 (11), 2017-2023 (2017).
Journal Article
Tobias Weinert, Natacha Olieric, Robert Cheng, Steffen Brünle, Daniel James, Dmitry Ozerov, Dardan Gashi, Laura Vera, May Marsh, Kathrin Jaeger, Florian Dworkowski, Ezequiel Panepucci, Shibom Basu, Petr Skopintsev, Andrew S. Dorè, Tian Geng, Robert M. Cooke, Mengning Liang, Andrea E. Prota, Valerie Paneels, Przemyslaw Nogly, Ulrich Ermler, Gebhard Schertler, Michael Hennig, Michel O. Steinmetz, Meitian Wang, and Jörg Standfuss, "Serial millisecond crystallography for routine room-temperature structure determination at synchrotrons," Nature Communications 8, 542 (2017).
Journal Article
Liping Bai, Tristan Wagner, Tao Xu, Xile Hu, Ulrich Ermler, and Seigo Shima, "A Water-Bridged H-Bonding Network Contributes to the Catalysis of the SAM-Dependent C-Methyltransferase HcgC," Angewandte Chemie, International Edition in English 56 (36), 10806-10809 (2017).
Journal Article
Tristan Wagner, Jürgen Koch, Ulrich Ermler, and Seigo Shima, "Methanogenic heterodisulfide reductase (HdrABC-MvhAGD) uses two noncubane [4Fe-4S] clusters for reduction," Science 357 (6352), 699-703 (2017).
Journal Article
Liping Bai, Takashi Fujishiro, Gangfeng Huang, Jürgen Koch , Atsushi Takabayashi, Makio Yokono , Ayumi Tanaka , Tao Xu, Xile Hu , Ulrich Ermler, and Shima Shima , "Towards artificial methanogenesis: biosynthesis of the [Fe]-hydrogenase cofactor and characterization of the semi-synthetic hydrogenase," Faraday Discussions 198 (37), 37-58 (2017).
Journal Article
Valentino Konjik, Steffen Brünle, Ulrike Demmer, Amanda Vanselow, Roger Sandhoff, Ulrich Ermler, and Matthias Mack, "The Crystal Structure of RosB: Insights into the Reaction Mechanism of the First Member of a Family of Flavodoxin-like Enzymes," Angewandte Chemie, International Edition in English 56 (4), 1146-1151 (2017).
Journal Article
Sina Weidenweber, Karola Schühle, Ulrike Demmer, Eberhard Warkentin, Ulrich Ermler, and Johann Heider, "Structure of the acetophenone carboxylase core complex: prototype of a new class of ATP-dependent carboxylases/hydrolases," Scientific Reports 7, 39674 (2017).
2016
Journal Article
Julius K. Demmer, Fiona A. Rupprecht, Martin L. Eisinger, Ulrich Ermler, and Julian David Langer, "Ligand binding and conformational dynamics in a flavin-based electron-bifurcating enzyme complex revealed by Hydrogen-Deuterium Exchange Mass Spectrometry," FEBS Letters 590 (24), 4472-4479 (2016).
Journal Article
Tristan Wagner , Ulrich Ermler, and Seiko Shima, "The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters," Science Magazine 354 (6308), 114-117 (2016).
Journal Article
Vikrant Upadhyay, Katharina Ceh, Franz Tumulka, Rupert Abele, Jan Hoffmann , Julian D. Langer, Seigo Shima, and Ulrich Ermler, "Molecular characterization of methanogenic N5-methyltetrahydromethanopterin: Coenzyme M methyltransferase," Biochimica et Biophysica Acta-Biomembranes 1858 (9), 2140-2144 (2016).
Journal Article
Tristan Wagner, Jörg Kahnt, Ulrich Ermler, and Seigo Shima, "Didehydroaspartate Modification in Methyl-Coenzyme M Reductase Catalyzing Methane Formation," Angewandte Chemie International Edition in English 55 (36), 10630-10633 (2016).
Journal Article
Takashi Fujishiro, Liping Bai , Tao Xu , Xiulan Xie , Michael Schick, Jörg Kahnt, Michael Rother, Xile Hu , Ulrich Ermler, and Seigo Shima, "Identification of HcgC as a SAM-Dependent Pyridinol Methyltransferase in [Fe]-Hydrogenase Cofactor Biosynthesis," Angewandte Chemie International Edition in English 55 (33), 9648-9651 (2016).
Journal Article
Tristan Wagner, Ulrich Ermler, and Seigo Shima, "MtrA of the sodium ion pumping methyltransferase binds cobalamin in a unique mode," Scientific Reports 6, 28226 (2016).
Journal Article
Sina Weidenweber, Robert Marmulla, Ulrich Ermler, and Jens Harder, "X-ray structure of linalool dehydratase/isomerase from Castellaniella defragrans reveals enzymatic alkene synthesis," FEBS Letters 590 (9), 1375-1383 (2016).
Journal Article
Matthias Boll, Oliver Einsle, Ulrich Ermler, and Peter M.H. Kroneck, "Structure and Function of the Unusual Tungsten Enzymes Acetylene Hydratase and Class II Benzoyl-Coenzyme A Reductase," Journal of Molecular Microbiology and Biotechnology 26 (1-3), 119-137 (2016).
Journal Article
Matthias Boll, Johannes W. Kung, Ulrich Ermler, Berta M. Martins, and Wolfgang Buckel, "Fermentative Cyclohexane Carboxylate Formation in Syntrophus aciditrophicus," Journal of Molecular Microbiology and Biotechnology 26 (1-3), 165-179 (2016).
Journal Article
Ralf Rabus, Matthias Boll , Johann Heider, Rainer U. Meckenstock, Wolfgang Buckel, Oliver Einsle, Ulrich Ermler, Bernard T. Golding, Robert P. Gunsalus, Peter M.H. Kroneck, Martin Krüger, Tillmann Lueders, Berta M. Martins, Florin Musat, Hans H. Richnow, Bernhard Schink, Jana Seifert, Maciej Szaleniec, Tina Treude, G. Matthias Ullmann, Carsten Vogt, Martin von Bergen, and Heinz Wilkes, "Anaerobic Microbial Degradation of Hydrocarbons: From Enzymatic Reactions to the Environment," Journal of Molecular Microbiology and Biotechnology 26 (1-3), 5-28 (2016).
2015
Journal Article
Julius K. Demmer, Haiyan Huang, Shuning Wang, Ulrike Demmer, Rudolf K. Thauer, and Ulrich Ermler, "Insights into Flavin-based Electron Bifurcation via the NADH-dependent Reduced Ferredoxin:NADP Oxidoreductase Structure," The Journal of Biological Chemistry 290 (36), 21985-21885 (2015).
Journal Article
Takashi Fujishiro, Kenichi Ataka, Ulrich Ermler, and Seigo Shima, "Towards a functional identification of catalytically inactive [Fe]-hydrogenase paralogs," FEBS Journal 282 (17), 3412-3423 (2015).
Journal Article
Tobias Weinert, Simona Huwiler, Johannes W. Kung, Sina Weidenweber, Petra Hellwig, Hans-Joachim Stärk, Till Biskup, Stefan Weber, Julien J.H. Cotelesage, Graham N. George, Ulrich Ermler, and Matthias Boll, "Structural basis of enzymatic benzene ring reduction," Nature Chemical Biology 11 (8), 586-591 (2015).
Journal Article
Takashi Fujishiro, Jörg Kahnt, Ulrich Ermler, and Seigo Shima, "Protein-pyridinol thioester precursor for biosynthesis of the organometallic acyl-iron ligand in [Fe]-hydrogenase cofactor," Nature Communications 6, e6895 (2015).
Journal Article
Ingo Rekittke, Eberhard Warkentin, Hassan Jomaa, and Ulrich Ermler, "Structure of the GcpE-HMBPP complex from Thermus thermophilius," Biochemical and Biophysical Research Communications 458 (2), 246-250 (2015).
2014
Journal Article
Juliane Poppe, Eberhard Warkentin, Ulrike Demmer, Björn Kowalewski, Thomas Dierks, Klaus Schneider, and Ulrich Ermler, "Structural diversity of polyoxomolybdate clusters along the three-fold axis of the molybdenum storage protein," Journal of Inorganic Biochemistry 138, 122-128 (2014).
Journal Article
Takashi Fujishiro, Ulrich Ermler, and Seigo Shima, "A possible iron delivery function of the dinuclear iron center of HcgD in [Fe]-hydrogenase cofactor biosynthesis," FEBS Letters 588 (17), 2789-2793 (2014).
Journal Article
Stella Vitt, Kesen Ma, Eberhard Warkentin, Johanna Moll, Antonio J. Pierik, Seigo Shima, and Ulrich Ermler, "The F420-Reducing [NiFe]-Hydrogenase Complex from Methanothermobacter marburgensis, the First X-ray Structure of a Group 3 Family Member," Journal of Molecular Biology (London) 426 (15), 2813-2826 (2014).
Journal Article
Sabine Buschmann, Sebastian Richers, Ulrich Ermler, and Hartmut Michel, "A decade of crystallization drops: Crystallization of the cbb3 cytochrome c oxidase from Pseudomonas stutzeri," Protein Science 23 (4), 411-422 (2014).
Journal Article
Nilanjan Pal Chowdhury, Amr M. Mowafy, Julius K. Demmer, Vikrant Upadhyay, Sebastian Koelzer, Elamparithi Jayamani, Joerg Kahnt, Marco Hornung, Ulrike Demmer, Ulrich Ermler, and Wolfgang Buckel, "Studies on the Mechanism of Electron Bifurcation Catalyzed by Electron Transferring Flavoprotein (Etf) and Butyryl-CoA Dehydrogenase (Bcd) of Acidaminococcus fermentans," The Journal of Biological Chemistry 289 (8), 5145-5157 (2014).
2013
Journal Article
Ingo Rekittke, Elena Olkhova, Jochen Wiesner, Ulrike Demmer, Eberhard Warkentin, Hassan Jomaa, and Ulrich Ermler, "Structure of the (E)-4-hydroxy-3-methyl-but-2-enyl-diphosphate reductase from Plasmodium falciparum," FEBS Letters 587 (24), 3968-3972 (2013).
Journal Article
Alistair J. Fielding, Kristian Parey, Ulrich Ermler, Silvan Scheller, Bernhard Jaun, and Marina Bennati, "Advanced electron paramagnetic resonance on the catalytic iron–sulfur cluster bound to the CCG domain of heterodisulfide reductase and succinate: quinone reductase," Journal of Biological Inorganic Chemistry 18 (8), 905-915 (2013).
Journal Article
Takashi Fujishiro, Haruka Tamura, Michael Schick, Jörg Kahnt, Xiulan Xie, Ulrich Ermler, and Seigo Shima, "Identification of the HcgB Enzyme in [Fe]-Hydrogenase-Cofactor Biosynthesis," Angwandte Chemie International Edition 52 (48), 12555-12558 (2013).
Journal Article
Haruka Tamura, Marco Salomone-Stagni, Takashi Fujishiro, Eberhard Warkentin, Wolfram Meyer-Klaucke, Ulrich Ermler, and Seigo Shima, "Crystal Structures of [Fe]-Hydrogenase in Complex with Inhibitory Isocyanides: Implications for the H2-Activation Site," Angwandte Chemie International Edition 52 (37), 9656-9659 (2013).
Journal Article
Kristian Parey, Ulrike Demmer, Eberhard Warkentin, Astrid Wynen, Ulrich Ermler, and Christiane Dahl, "Structural, Biochemical and Genetic Characterization of Dissimilatory ATP Sulfurylase from Allochromatium vinosum," PLoS ONE 8 (9), e74707-e74707 (2013).
Journal Article
Kristian Parey, Günter Fritz, Ulrich Ermler, and Peter M. H. Kroneck, "Conserving energy with sulfate around 100 °C - structure and mechanism of key metal enzymes in hyperthermophilic Archaeoglobus fulgidus," Metallomics 5 (4), 302-317 (2013).
Journal Article
Ulrike Demmer, Eberhard Warkentin, Ankita Srivastava, Daniel Kockelkorn, Markus Pötter, Achim Marx, Georg Fuchs, and Ulrich Ermler, "Structural Basis for a Bispecific NADP+ and CoA Binding Site in an Archaeal Malonyl-Coenzyme A Reductase," The Journal of Biological Chemistry 288 (9), 6363-6370 (2013).
2012
Journal Article
Emna El Hammi, Eberhard Warkentin, Ulrike Demmer, Nejib M. Marzouki, Ulrich Ermler, and Laura Baciou, "Active site analysis of yeast flavohemoglobin based on its structure with a small ligand or econazole," The FEBS Journal 279 (24), 4565-4575 (2012).
Journal Article
Vikrant Upadhyay, Ulrike Demmer, Eberhard Warkentin, Johanna Moll, Seigo Shima, and Ulrich Ermler, "Structure and Catalytic Mechanism of N5,N10-Methenyltetrahydromethanopterin Cyclohydrolase," Biochemistry 51 (42), 8435-8443 (2012).
Journal Article
Ingo Rekittke, Hassan H. Jomaa, and Ulrich Ermler, "Structure of the GcpE (IspG)-MEcPP complex from Thermus thermophilus," FEBS Letters 586 (19), 3452-3457 (2012).
Journal Article
Björn Kowalewski, Juliane Poppe, Ulrike Demmer, Eberhard Warkentin, Thomas Dierks, Ulrich Ermler, and Klaus Schneider, "Nature’s Polyoxometalate Chemistry: X-ray Structure of the Mo Storage Protein Loaded with Discrete Polynuclear Mo−O Clusters," Journal of the American Chemical Society 134 (23), 9768-9774 (2012).
Journal Article
Alma Steinbach, Sonja Fraas, Jens Harder, Eberhard Warkentin, Peter M. H. Kroneck, and Ulrich Ermler, "Crystal structure of a ring-cleaving cyclohexane-1,2-dione hydrolase, a novel member of the thiamine diphosphate enzyme family," The FEBS Journal 279 (7), 1209-1219 (2012).
Journal Article
Seigo Shima, Martin Krueger, Tobias Weinert, Ulrike Demmer, Jörg Kahnt, Rudolf K. Thauer, and Ulrich Ermler, "Structure of a methyl-coenzyme M reductase from Black Sea mats that oxidize methane anaerobically," Nature 481 (7379), 98-101 (2012).
Journal Article
Seigo Shima and Ulrich Ermler, "Crystal structure and biochemistry of methyl-coenzyme M reductase from Black Sea mats mediating anaerobic oxidation of methane," Biseibutsu Seitai 27 (2), 55-62 (2012).
2011
Journal Article
Alma K. Steinbach, Sonja Fraas, Jens Harder, Anja Tabbert, Henner Brinkmann, Axel Meyer, Ulrich Ermler, and Peter M. H. Kroneck, "Cyclohexane-1,2-Dione Hydrolase from Denitrifying Azoarcus sp. Strain 22Lin, a Novel Member of the Thiamine Diphosphate Enzyme Family," Journal of Bacteriology 193 (23), 6760-6769 (2011).
Journal Article
Liv J. Rather, Tobias Weinert, Ulrike Demmer, Eckhard Bill, Wael Ismail, Georg Fuchs, and Ulrich Ermler, "Structure and Mechanism of the Diiron Benzoyl-Coenzyme A Epoxidase BoxB," The Journal of Biological Chemistry 286 (33), 29241-29248 (2011).
Journal Article
Seigo Shima and Ulrich Ermler, "Structure and Function of [Fe]-Hydrogenase and its Iron–Guanylylpyridinol (FeGP) Cofactor," Hydrogenases , 963-972 (2011).
Journal Article
Dominik Barthelme, Stephanie Dinkelaker, Sonja-Verena Albers, Paola Londei, Ulrich Ermler, and Robert Tampé, "Ribosome recycling depends on a mechanistic link between the FeS cluster domain and a conformational switch of the twin-ATPase ABCE1," Proceedings of the National Academy of Sciences of the United States of America 108 (8), 3228-3233 (2011).
Journal Article
Emna El Hammi, Eberhard Warkentin, Ulrike Demmer, Férid Limam, Nejib M. Marzouki, Ulrich Ermler, and Laura Baciou, "Structure of Ralstonia eutropha Flavohemoglobin in Complex with Three Antibiotic Azole Compounds," Biochemistry 50 (7), 1255-1264 (2011).
Journal Article
Ingo Rekittke, Tsuyoshi Nonaka, Jochen Wiesner, Ulrike Demmer, Eberhard Warkentin, Hassan Jomaa, and Ulrich Ermler, "Structure of the E-1-hydroxy-2-methyl-but-2-enyl-4-diphosphate synthase (GcpE) from Thermus thermophilus," FEBS Letters 585 (3), 447-451 (2011).
2010
Journal Article
Sabine Buschmann, Eberhard Warkentin, Hao Xie, Julian D. Langer, Ulrich Ermler, and Hartmut Michel, "The Structure of cbb3 Cytochrome Oxidase Provides Insights into Proton Pumping," Science 329 (5989), 327-330 (2010).
Journal Article
Chitra Rajendran, Ulrich Ermler, Bernd Ludwig, and Hartmut Michel, "Structure at 1.5 Å resolution of cytochrome c552 with its flexible linker segment, a membrane-anchored protein from Paracoccus denitrificans," Acta Crystallographica Section D - Biological Crystallography D66 (7), 850-854 (2010).
Journal Article
Marco Marcia, Ulrich Ermler, Guohong Peng, and Hartmut Michel, "A new structure-based classification of sulfide:quinone oxidoreductases," Proteins: Structure, Function, and Bioinformatics 78 (5), 1073-1083 (2010).
Journal Article
Kristian Parey, Eberhard Warkentin, Peter M. Kroneck, and Ulrich Ermler, "Reaction Cycle of the Dissimilatory Sulfite Reductase from Archaeoglobus fulgidus," Biochemistry 49 (41), 8912-8921 (2010).
Journal Article
Simon Wischgoll, Ulrike Demmer, Eberhard Warkentin, Robert Günther, Matthias Boll, and Ulrich Ermler, "Structural Basis for Promoting and Preventing Decarboxylation in Glutaryl-Coenzyme A Dehydrogenases," Biochemistry 49 (25), 5350-5357 (2010).
2009
Journal Article
Katharina Ceh, Ulrike Demmer, Eberhard Warkentin, Johanna Moll, Rudolf K. Thauer, Seigo Shima, and Ulrich Ermler, "Structural Basis of the Hydride Transfer Mechanism in F420-Dependent Methylenetetrahydromethanopterin Dehydrogenase," Biochemistry 49 (42), 10098-10105 (2009).
Journal Article
Sonja Fraas, Alma K. Steinbach, Anja Tabbert, Jens Harder, Ulrich Ermler, Kai Tittmann, Axel Meyer, and Peter M. H. Kroneck, "Cyclohexane-1,2-dione hydrolase: A new tool to degrade alicyclic compounds," Journal of Molecular Catalysis B: Enzymatic 61 (1-2), 47-49 (2009).
Journal Article
Takeshi Hiromoto, Kenichi Ataka, Oliver Pilak, Sonja Vogt, Marco Salomone Stagni, Wolfram Meyer-Klaucke, Eberhard Warkentin, Rudolf K. Thauer, Seigo Shima, and Ulrich Ermler, "The crystal structure of C176A mutated [Fe]-hydrogenase suggests an acyl-iron ligation in the active site iron complex," FEBS Letters 583 (3), 585-590 (2009).
Journal Article
Takeshi Hiromoto, Eberhard Warkentin, Johanna Moll, Ulrich Ermler, and Seigo Shima, "The Crystal Structure of an [Fe]-Hydrogenase-Substrate Complex Reveals the Framework for H2 Activation," Angewandte Chemie International Edition 48 (35), 6457-6460 (2009).
Journal Article
Marco Marcia, Ulrich Ermler, Guohong Peng, and Hartmut Michel, "The structure of Aquifex aeolicus sulfide:quinone oxidoreductase, a basis to understand sulfide detoxification and respiration," Proceedings of the National Academy of Sciences of the United States of America 106 (24), 9625-9630 (2009).
2008
Journal Article
Johannes Jörg, Mihaela-Carmen Unciuleac, Thorsten Friedrich, Eberhard Warkentin, Uli Ermler, and Matthias Boll, "Inhibitors of the Molybdenum Cofactor Containing 4-Hydroxybenzoyl-CoA Reductase," Biochemistry 47 (17), 4964-4972 (2008).
Journal Article
Alexander Schiffer, Kristian Parey, Eberhard Warkentin, Kay Diederichs, Harald Huber, Karl O. Stetter, Peter M. H. Kroneck, and Ulrich Ermler, "Structure of the Dissimilatory Sulfite Reductase from the Hyperthermophilic Archaeon Archaeoglobus fulgidus," Journal of Molecular Biology 379 (5), 1063-1074 (2008).
Journal Article
Seigo Shima, Oliver Pilak, Sonja Vogt, Michael Schick, Marco S. Stagni, Wolfram Meyer-Klauke, Eberhard Warkentin, Rudolf K. Thauer, and Ulrich Ermler, "The Crystal Structure of [Fe]-Hydrogenase Reveals the Geometry of the Active Site," Science 321, 572-575 (2008).
2007
Journal Article
Pedro de Olivereira, Alireza Ranjbari, Laura Baciou, Tania Bizouarn, Gabriela Ollesch, Ulrich Ermler, Pierre Sebban, Bineta Keita, and Louis Nadjo, "Preliminary electrochemical studies of the flavohaemoprotein from Ralstonia eutropha entrapped in a film of methyl cellulose: activation of the reduction of dioxygen," Biolectrochemistry 70, 185-191 (2007).
Journal Article
Jörg Schemberg, Klaus Schneider, Ulrike Demmer, Eberhard Warkentin, Achim Müller, and Ulrich Ermler, "Towards Biological Supramolecular Chemistry: A Variety of Pocket-Templated Metal Oxide Cluster Nucleations in the Cavity of a Mo/W-Storage Protein," Angewandte Chemie, International Edition 46, 2408-2413 (2007).
Journal Article
Henning Seedorf, Christoph H. Hagemeier, Seigo Shima, Rudolf K. Thauer, Eberhard Warkentin, and Ulrich Ermler, "Structure of coenzyme F420H2 oxidase (FprA), a di-iron flavoprotein from methanogenic Archaea catalysing the reduction of O2 to H2O," FEBS Journal 274, 1588-1599 (2007).
2006
Journal Article
Christoph H. Hagemeier, Markus Krüer, Rudolf Thauer, Eberhard Warkentin, and Ulrich Ermler, "Insight into the mechanism of biological methanol activation based on the crystal structure of the methanol-cobalamin methyltransferase complex," Proceedings of the National Academy of Sciences USA 103 (50), 18917-18922 (2006).
Journal Article
Oliver Pilak, Björn Mamat, Sonja Vogt, Christoph H. Hagemeier, Rudolf Thauer, Seigo Shima, Clemens Vonrhein, Eberhard Warkentin, and Ulrich Ermler, "The Crystal Structure of the Apoenzyme of the Iron-Sulphur Cluster-free Hydrogenase," Journal of Molecular Biology 358 (3), 798-809 (2006).
Journal Article
Priyamvada Acharya, Eberhard Warkentin, Ulrich Ermler, Rudolf K. Thauer, and Seigo Shima, "The structure of a Formylmethanofuran: Tetrahydromethanopterin Formyltransferase in Complex with its Coenzymes," Journal of Molecular Biology 357 (3), 870-879 (2006).
Journal Article
Alexander Schiffer, Günter Fritz, Peter M.H. Kroneck, and Ulrich Ermler, "Reaction Mechanism of the Iron-Sulfur Flavoenzyme Adenosine-5 '-Phosphosulfate Reductase Based on the Structural Characterization of Different Enzymatic States," Biochemistry 45 (9), 2960-2967 (2006).
2005
Journal Article
Priyamvada Acharya, Meike Goenrich, Christoph H. Hagemeier, Julia A. Vorholt, Rudolf K. Thauer, and Ulrich Ermler, "How an Enzyme Binds the C1 Carrier Tetrahydromethanopterin. Structure of the Tetrahydromethanopterin-Dependent Formaldehyde-Activating Enzyme (Fae) from Methylobacterium extorquens AM1," Journal of Biological Chemistry 280 (14), 13712-13719 (2005).
Journal Article
Stephan W. Aufhammer, Eberhard Warkentin, Ulrich Ermler, Christoph H. Hagemeier, Rudolf K. Thauer, and Seiko Shima, "Crystal structure of methylenetetrahydromethanopterin (Mer) in complex with coenzyme F420: Architecture of the F420/FMN binding site of enzymes within the nonprolyl cis-peptide containing bacterial luciferase family," Protein Science 14, 1840-1849 (2005).
Journal Article
Ulrich Ermler, "On the mechanism of methyl-coenzyme M reductase," Dalton Transactions 21, 3451-3458 (2005).
Journal Article
Gerd J. Mander, Manfred S. Weiss, Reiner Hedderich, Jörg Kahnt, Ulrich Ermler, and Eberhard Warkentin, "X-ray structure of the γ-subunit of a dissimilatory sulfite reductase: Fixed and flexible C-terminal arms," FEBS Letters 579, 4600-4604 (2005).
Journal Article
Frank Scheffel, Eberhard Warkentin, Anja Hülsmann, Erwin Schneider, and Ulrich Ermler, "Structure of the ATPase subunit CysA of the putative sulfate ATP-binding cassette (ABC) transporter from Alicyclobacillus acidocaldarius," FEBS Letters 579, 2953-2958 (2005).
Journal Article
Eberhard Warkentin, Christoph H. Hagemeier, Seiko Shima, Rudolf K. Thauer, and Ulrich Ermler, "The structure of F420-dependent methylenetetrahydromethanopterin dehydrogenase: a crystallographic 'superstructure' of the selenomethionine-labelled protein crystal structure," Biological Crystallography , 198-202 (2005).
2004
Journal Article
Stephan W. Aufhammer, Eberhard Warkentin, Holger Berk, Seigo Shima, Rudolf K. Thauer, and Ulrich Ermler, "Coenzyme binding in F420-dependent secondary alcohol dehydrogenase, a member of the bacterial luciferase family," Structure 12, 361-370 (2004).
Journal Article
S. Shima, R.K. Thauer, and Ulrich Ermler, "Hyperthermophilic and salt-dependent formyltransferase from Methanopyrus kandleri," Biochemical Society Transactions 32, 269-272 (2004).
Journal Article
Mihaela Unciuleac, Matthias Boll, Eberhard Warkentin, and Ulrich Ermler, "Crystallization of 4-hydroxybenzoyl-CoA reductase and the structure of its electron donor ferredoxin," Acta Crystallographica Section D - Biological Crystallography 60, 388-391 (2004).
Journal Article
Mihaela Unciuleac, Eberhard Warkentin, Christopher C. Page, Matthias Boll, and Ulrich Ermler, "Structure of Xanthine Oxidase-Related 4-Hydroxybenzoyl-CoA Reductase with an Additional [4Fe-4S] Cluster and an Inverted Electron Flow," Structure 12, 2249-2256 (2004).
Journal Article
Manfred S. Weiss, Gerd Mander, Reiner Hedderich, Kay Diederichs, Ulrich Ermler, and Eberhard Warkentin, "Protein structure determination by a combination of long wavelength sulphur phasing and radiation damage induced phasing," Acta Crystallographica Section D - Biological Crystallography 60, 686-695 (2004).
2002
Journal Article
U. Ermler, C. H. Hagemeier, A. Roth, U. Demmer, W. Grabarse, E. Warkentin, and J. A. Vorhott, "Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1," Structure 10 (8), 1127-1137 (2002).
Journal Article
G. Fritz, A. Roth, A. Schiffer, T. Buchert, G. Bourenkov, H. D. Bartunik, H. Huber, K. O. Stetter, P. M. H. Kroneck, and U. Ermler, "Structure of adenylylsulfate reductase from the hyperthermophilic Archaeoglobus fulgidus at 1.6-Å resolution," Proceedings of the National Academy of Sciences of the United States of America 99 (4), 1836-1841 (2002).
Journal Article
B. Mamat, A. Roth, C. Grimm, U. Ermler, C. Tziatzios, D. Schubert, R. K. Thauer, and S. Shima, "Crystal structures and enzymatic properties of three formyltransferases from archaea: Environmental adaptation and evolutionary relationship," Protein Science 11 (9), 2168-2178 (2002).
Journal Article
S. Shima, E. Warkentin, R. K. Thauer, and U. Ermler, "Structure and function of enzymes involved in the methanogenic pathway utilizing carbon dioxide and molecular hydrogen [Review]," Journal of Bioscience & Bioengineering 93 (6), 519-530 (2002).
1997
Journal Article
Christian Ostermeier, Axel Harrenga, Ulrich Ermler, and Hartmut Michel, "Structure at 2.7 Å resolution of the Paracoccus denitrificans two subunit cytochrome c oxidase complexed with an antibody Fv fragment," Proceedings of the National Academy of Sciences of the United States of America 94 (20), 10547-10553 (1997).

Book Chapter (4)

2017
Book Chapter
Silvan Scheller, Ulrich Ermler, and Seigo Shima, "Catabolic Pathways and Enzymes Involved in Anaerobic Methane Oxidation", in Handbook of Hydrocarbon and Lipid Microbiology, (Springer International Publishing AG 2017, 6330 Cham Switzerland, 2017), pp. 1-29.
2015
Book Chapter
Seigo Shima, Takashi Fujishiro, and Ulrich Ermler, "Structure and function of [Fe]-hydrogenase and biosynthesis of the FeGP cofactor", in Biohydrogen, edited by Matthias Rögner (Walter de Gruyter GmbH, Berlin, 2015), pp. 127-144.
2011
Book Chapter
Kristian Parey, Alexander Schiffer, Julia Steuber, Günter Fritz, Ulrich Ermler, and Peter M. H. Kroneck, "Dissimilatory Sulfite Reductase", in Handbook of Metalloproteins, Volume 4, edited by Albrecht Messerschmidt (John Wiley & Sons Ltd, The Atrium, Chichester, West Sussex, United Kingdom, 2011), pp. 103-110.
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