Publications of the Max Planck Institute

Publications of Julian David Langer

Journal Article (54)

1.
Journal Article
Ahrens, C. H.; Wade, J. T.; Champion, M. M.; Langer, J. D.: A Practical Guide to Small Protein Discovery and Characterization using Mass Spectrometry. Journal of Bacteriology (2021)
2.
Journal Article
Fusco, C. M.; Desch, K.; Dörrbaum, A. R.; Wang, M.; Staab, A.; Chan, I. C. W.; Vail, E.; Villeri, V.; Langer, J. D.; Schuman, E. M.: Neuronal ribosomes exhibit dynamic and context-dependent exchange of ribosomal proteins. Nature Communications 12 (1), 6127 (2021)
3.
Journal Article
Desch, K.; Langer, J. D.; Schuman, E. M.: Dynamic bi-directional phosphorylation events associated with the reciprocal regulation of synapses during homeostatic up- and down-scaling. Cell Reports 36 (8), 109583 (2021)
4.
Journal Article
Zabret, J.; Bohn, S.; Schuller, S. K.; Arnolds, O.; Möller, M.; Meier-Credo, J.; Liauw, P.; Chan, A.; Tajkhorshid, E.; Langer, J. D. et al.; Stoll, R.; Krieger-Liszkay, A.; Engel, B. D.; Rudack , T.; Schuller, J. M.; Nowaczyk , M. M.: Structural insights into photosystem II assembly. Nature Plants 7, pp. 524 - 538 (2021)
5.
Journal Article
Ross, A. B.; Langer, J. D.; Jovanovic, M.: Proteome Turnover in the Spotlight: Approaches, Applications, and Perspectives. Molecular and Cellular Proteomics 20, 100016 (2021)
6.
Journal Article
Lyratzakis, A.; Valsamidis, G.; Kanavaki, I.; Nikolaki , A.; Rupprecht, F. A.; Langer, J. D.; Tsiotis, G.: Proteomic Characterization of the Pseudomonas sp. Strain phDV1 Response to Monocyclic Aromatic Compounds. Proteomics 21 (2), e2000003 (2021)
7.
Journal Article
Schulte, L.; Mao, J.; Reitz, J.; Sreeramulu, S.; Kudlinzki, D.; Hodirnau, V.-V.; Meier-Credo, J.; Saxena, K.; Buhr, F.; Langer, J. D. et al.; Blackledge, M.; Frangakis, A. S.; Glaubitz, C.; Schwalbe, H.: Cysteine oxidation and disulfide formation in the ribosomal exit tunnel. Nature Communications 11 (1), 5569 (2020)
8.
Journal Article
Neuhaus, A.; Selvaraj, M.; Salzer, R.; Langer, J. D.; Kruse, K.; Kirchner, L.; Sanders, K.; Daum, B.; Averhoff, B.; Gold, V.: Cryo-electron microscopy reveals two distinct type IV pili assembled by the same bacterium. Nature Communications 11, 2231 (2020)
9.
Journal Article
Altincekic, N.; Löhr, F.; Meier-Credo, J.; Langer, J. D.; Hengesbach, M.; Richter, C.; Schwalbe, H.: Site-Specific Detection of Arginine Methylation in Highly Repetitive Protein Motifs of Low Sequence Complexity by NMR. Journal of the American Chemical Society 142 (16), pp. 7647 - 7654 (2020)
10.
Journal Article
Dörrbaum, A. R.; Alvarez-Castelao, B.; Nassim-Assir, B.; Langer, J. D.; Schuman, E. M.: Proteome dynamics during homeostatic scaling in cultured neurons. eLife 9, e52939 (2020)
11.
Journal Article
Biever, A.; Glock, C.; Tushev, G.; Ciirdaeva, E.; Dalmay, T.; Langer, J. D.; Schuman, E. M.: Monosomes actively translate synaptic mRNAs in neuronal processes. Science 367 (6477), eaay4991, p. 526 (2020)
12.
Journal Article
Brünle, S.; Eisinger, M. L.; Poppe, J.; Mills, D. J.; Langer, J. D.; Vonck, J.; Ermler, U.: Molybdate pumping into the molybdenum storage protein via an ATP-powered piercing mechanism. Proceedings of the National Academy of Sciences of the United States of America 52 (116), pp. 26497 - 26504 (2019)
13.
Journal Article
Wang, X.; You, X.; Langer, J. D.; Hou, J.; Rupprecht, F.; Vlatkovic, I.; Quedenau, C.; Tushev, G.; Epstein, I.; Schaefke, B. et al.; Sun , W.; Fang, L.; Li, G.; Hu , Y.; Schuman, E. M.; Chen, W.: Full-length transcriptome reconstruction reveals a large diversity of RNA and protein isoforms in rat hippocampus. Nature Communications 10, 5009 (2019)
14.
Journal Article
Safarian, S.; Hahn, A.; Mills, D.; Radloff, M.; Eisinger, M. L.; Nikolaev, A.; Meier-Credo, J.; Melin, F.; Miyoshi, H.; Gennis, R.B. et al.; Sakamoto, J.; Langer, J. D.; Hellwig, P.; Kühlbrandt, W.; Michel, H.: Active site rearrangement and structural divergence in prokaryotic respiratory oxidases. Science 366 (6461), pp. 100 - 104 (2019)
15.
Journal Article
Kourpa, K.; Manarolaki, E.; Lyratzakis, A.; Strataki, V.; Rupprecht, F. A.; Langer, J. D.; Tsiotis, G.: Proteome Analysis of Enriched Heterocysts from Two Hydrogenase Mutants from Anabaena sp. PCC 7120. Proteomics 19 (19), 1800332 (2019)
16.
Journal Article
Murphy, B. J.; Klusch, N.; Langer, J. D.; Mills, D.; Yildiz, Ö.; Kühlbrandt, W.: Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F1-Fo coupling. Science 364 (6446), eaaw9128, p. 1155 (2019)
17.
Journal Article
Langebeck-Jensen, K.; Shahar, O. D.; Schuman, E. M.; Langer, J. D.; Soojin, R.: Larval Zebrafish Proteome Regulation in Response to an Environmental Challenge. Proteomics 19 (14), 1900028 (2019)
18.
Journal Article
Alvarez-Castelao, B.; Schanzenbächer, C. T.; Langer, J. D.; Schuman, E. M.: Cell-type-specific metabolic labeling, detection and identification of nascent proteomes in vivo. Nature Protocols 14 (2), pp. 556 - 575 (2019)
19.
Journal Article
Reiter, S.; Hülsdunk, P.; Woo, T.; Eberle, J. S.; Akay, L. A.; Longo, A.; Meier-Credo, J.; Kretschmer, F.; Langer, J. D.; Kaschube, M. et al.; Laurent, G.: Elucidating the control and development of skin patterning in cuttlefish. Nature 562 (7727), pp. 361 - 366 (2018)
20.
Journal Article
Dörrbaum, A. R.; Kochen, L.; Langer, J. D.; Schuman, E. M.: Local and global influences on protein turnover in neurons and glia. eLife 7, e34202 (2018)
21.
Journal Article
Sousa, J. S.; Calisto, F.; Langer, J. D.; Mills, D. J.; Refojo, P. N.; Teixeira, M.; Kühlbrandt, W.; Vonck, J.; Pereira, M. M.: Structural basis for energy transduction by respiratory alternative complex III. Nature Communications 9, 1728 (2018)
22.
Journal Article
Eisinger, M. L.; Nie, L.; Dörrbaum, A. R.; Langer, J. D.; Michel, H.: The Xenobiotic Extrusion Mechanism of the MATE Transporter NorM_PS from Pseudomonas stutzeri. Journal of Molecular Biology (London) 430 (9), pp. 1311 - 1323 (2018)
23.
Journal Article
Groß, A. S.; Schulz, C.; Kolb, J.; Koster, J.; Wehner, S.; Czaplinski, S.; Khilan, A.; Rohrer, H.; Harter, P. N.; Klingebiel, T. et al.; Langer, J. D.; Geerts, D.: Tumorigenic and Antiproliferative Properties of the TALE-Transcription Factors MEIS2D and MEIS2A in Neuroblastoma. Cancer research: an official organ of the American Association for Cancer Research 78 (8), pp. 1935 - 1947 (2018)
24.
Journal Article
Schanzenbächer, C. T.; Langer, J. D.; Schuman, E. M.: Time- and polarity-dependent proteomic changes associated with homeostatic scaling at central synapses. eLife 7, e33322 (2018)
25.
Journal Article
Alvarez-Castelao, B.; Schanzenbächer, C. T.; Hanus, C.; Glock, C.; tom Dieck, S.; Dörrbaum, A. R.; Bartnik, I.; Nassim-Assir, B.; Ciirdaeva, E.; Mueller , A. et al.; Dietrich, D. C.; Tirrell, D. A.; Langer, J. D.; Schuman, E. M.: Cell-type-specific metabolic labeling of nascent proteomes in vivo. Nature Biotechnology 35 (12), pp. 1196 - 1201 (2017)
26.
Journal Article
Eisinger, M. L.; Dörrbaum, A. R.; Michel, H.; Padan, E.; Langer, J. D.: Ligand-induced conformational dynamics of the Escherichia coli Na+/H+ antiporter NhaA revealed by hydrogen/deuterium exchange mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America 114 (44), pp. 11691 - 11696 (2017)
27.
Journal Article
Bausewein, T.; Mills, D. J.; Langer, J. D.; Nitschke, B.; Nussberger, S.; Kühlbrandt, W.: Cryo-EM Structure of the TOM Core Complex from Neurospora crassa. Cell 170 (4), pp. 693 - 700 (2017)
28.
Journal Article
Hau, A.-C.; Grebbin, B. M.; Agoston, Z.; Anders-Maurer, M.; Müller, T.; Groß, A.; Kolb, J.; Langer, J. D.; Döring, C.; Schulte, D.: MEIS homeodomain proteins facilitate PARP1/ARTD1-mediated eviction of histone H1. The Journal of Cell Biology: JCB 216 (9), pp. 2715 - 2729 (2017)
29.
Journal Article
Kohlstädt, M.; Buschmann, S.; Langer, J. D.; Xie, H.; Michel, H.: Subunit CcoQ is involved in the assembly of the Cbb3-type cytochrome c oxidases from Pseudomonas stutzeri ZoBell but not required for their activity. Biochimica et Biophysica Acta, Bioenergetics 1858 (3), pp. 231 - 238 (2017)
30.
Journal Article
Demmer, J. K.; Rupprecht, F. A.; Eisinger, M. L.; Ermler, U.; Langer, J. D.: Ligand binding and conformational dynamics in a flavin-based electron-bifurcating enzyme complex revealed by Hydrogen-Deuterium Exchange Mass Spectrometry. FEBS Letters 590 (24), pp. 4472 - 4479 (2016)
31.
Journal Article
Schanzenbächer, C.; Sambandan, S.; Langer, J. D.; Schuman, E. M.: Nascent Proteome Remodeling following Homeostatic Scaling at Hippocampal Synapses. Neuron 92 (2), pp. 358 - 371 (2016)
32.
Journal Article
Hanus, C.; Geptin, H.; Tushev, G.; Garg, S.; Alvarez-Castelao, B.; Sambandan, S.; Kochen, L.; Hafner, A.-S.; Langer, J. D.; Schuman, E. M.: Unconventional secretory processing diversifies neuronal ion channel properties. eLife 5, e20609 (2016)
33.
Journal Article
Upadhyay, V.; Ceh, K.; Tumulka, F.; Abele, R.; Hoffmann , J.; Langer, J. D.; Shima, S.; Ermler, U.: Molecular characterization of methanogenic N5-methyltetrahydromethanopterin: Coenzyme M methyltransferase. Biochimica et Biophysica Acta-Biomembranes 1858 (9), pp. 2140 - 2144 (2016)
34.
Journal Article
Safarian, S.; Rajendran, C.; Müller, H.; Preu, J.; Langer, J. D.; Ovchinnikov, S.; Hirose, T.; Kusumoto, T.; Sakamoto, J.; Michel, H.: Structure of a bd oxidase indicates similar mechanisms for membrane-integrated oxygen reductases. Science 352 (6285), pp. 583 - 586 (2016)
35.
Journal Article
Brandt, K.; Müller, D. B.; Hoffmann, J.; Langer, J. D.; Brutschy, B.; Morgner, N.; Müller, V.: Stoichiometry and deletion analyses of subunits in the heterotrimeric F-ATP synthase c ring from the acetogenic bacterium Acetobacterium woodii. The FEBS Journal 283 (3), pp. 510 - 520 (2016)
36.
Journal Article
Kohlstädt, M.; Buschmann, S.; Xie, H.; Resemann, A.; Warkentin, E.; Langer, J. D.; Michel, H.: Identification and characterization of the novel subunit CcoM in the cbb3-cytochrome c oxidase from Pseudomonas stutzeri ZoBell. mBio 7 (7), pp. 1 - 9 (2016)
37.
Journal Article
Joedicke, L.; Trenker, R.; Langer, J. D.; Michel, H.; Preu, J.: Cell-free synthesis of isotopically labelled peptide ligands for the functional characterization of G protein-coupled receptors. FEBS Open Bio 6 (1), pp. 90 - 102 (2016)
38.
Journal Article
Fischer, F.; Langer, J. D.; Osiewacz, H. D.: Identification of potential mitochondrial CLPXP protease interactors and substrates suggests its central role in energy metabolism. Scientific Reports 5, e18375 (2015)
39.
Journal Article
Stammler, D.; Eigenbrod, T.; Menz, S.; Frick, J. S.; Sweet, M. J.; Shakespear, M. R.; Jantsch, J.; Siegert, I.; Wölfle, S.; Langer, J. D. et al.; Oehme, I.; Schaefer, L.; Fischer, A.; Knievel, J.; Heeg, K.; Dalpke, A. H.; Bode, K. A.: Inhibition of Histone Deacetylases Permits Lipopolysaccharide-Mediated Secretion of Bioactive IL-1β via a Caspase-1–Independent Mechanism. Journal of Immunology 195 (11), pp. 5421 - 5431 (2015)
40.
Journal Article
Bertsch, J.; Öppinger, C.; Hess, V.; Langer, J. D.; Müller, V.: Heterotrimeric NADH-Oxidizing Methylenetetrahydrofolate Reductase from the Acetogenic Bacterium Acetobacterium woodii. Journal of Bacteriology (Washington, DC) 197 (9), pp. 1681 - 1689 (2015)
41.
Journal Article
Mayer, F.; Lim, J. K.; Langer, J. D.; Kang, S. G.; Müller, V.: Na+ Transport by the A1AO-ATP Synthase Purified from Thermococcus onnurineus and Reconstituted into Liposomes. The Journal of Biological Chemistry 290 (11), pp. 6994 - 7002 (2015)
42.
Journal Article
Preiss, L.; Langer, J. D.; Yildiz, Ö.; Eckhardt-Strelau, L.; Guillemont, J. E. G.; Koul, A.; Meier, T.: Structure of the mycobacterial ATP synthase Fo rotor ring in complex with the anti-TB drug bedaquiline. Science Advances 1 (4), pp. 1 - 8 (2015)
43.
Journal Article
Naß, B.; Pöll, U.; Langer, J. D.; Kreuter, L.; Küper, U.; Flechsler, J.; Heimerl, T.; Rachel, R.; Huber, H.; Kletzin, A.: Three multihaem cytochromes c from the hyperthermophilic archaeon Ignicoccus hospitalis: purification, properties and localization. Microbiology/SGM 160 (6), pp. 1278 - 1289 (2014)
44.
Journal Article
Xie, H.; Buschmann, S.; Langer, J. D.; Ludwig, B.; Michel, H.: Biochemical and Biophysical Characterization of the Two Isoforms of cbb3-Type Cytochrome c Oxidase from Pseudomonas stutzeri. Journal of Bacteriology (Washington, DC) 196 (2), pp. 472 - 482 (2014)
45.
Journal Article
Zhang, C.; Allegretti, M.; Vonck, J.; Langer, J.; Marcia, M.; Peng, G.; Michel, H.: Production of fully assembled and active Aquifex aeolicus F1FO ATP synthase in Escherichia coli. Biochimica et Biophysica Acta (BBA) - General Subjects 1840 (1), pp. 34 - 40 (2014)
46.
Journal Article
Zhang, C.; Marcia, M.; Langer, J. D.; Peng, G.; Michel, H.: Role of the N-terminal signal peptide in the membrane insertion of Aquifex aeolicus F1F0 ATP synthase c-subunit. The FEBS Journal 280 (14), pp. 3425 - 3435 (2013)
47.
Journal Article
Wang, T.; Langer, J. D.; Peng, G.; Michel, H.: Isolation, functional characterization and crystallization of Aq_1259, an outer membrane protein with porin features, from Aquifex aeolicus. Biochimica et Biophysica Acta-Proteins and Proteomics 1824 (12), pp. 1358 - 1365 (2012)
48.
Journal Article
Pogoryelov, D.; Klyszejko, A.; Krasnoselska, G. O.; Heller, E.-M.; Leone, V.; Langer, J. D.; Vonck, J.; Müller, D. J.; Faraldo-Gómez, J. D.; Meier, T.: Engineering rotor ring stoichiometries in the ATP synthase. Proceedings of the National Academy of Sciences of the United States of America 109 (25), pp. E1599 - E1608 (2012)
49.
Journal Article
Kliefoth, M.; Langer, J. D.; Matschiavelli, N.; Oelgeschläger, E.; Rother, M.: Genetic analysis of MA4079, an aldehyde dehydrogenase homolog, in Methanosarcina acetivorans. Archives of Microbiology 194 (2), pp. 75 - 85 (2012)
50.
Journal Article
Popoff, V.; Langer, J. D.; Reckmann, I.; Hellwig, A.; Khan, R. A.; Brügger, B.; Wieland, F. T.: Several ADP-ribosylation Factor (Arf) Isoforms Support COPI Vesicle Formation. The Journal of Biological Chemistry 286 (41), pp. 35634 - 35642 (2011)
51.
Journal Article
Marcia, M.; Langer, J. D.; Parcej, D.; Vogel, V.; Peng, G.; Michel, H.: Characterizing a monotopic membrane enzyme. Biochemical, enzymatic and crystallization studies on Aquifex aeolicus sulfide:quinone oxidoreductase. Biochimica et Biophysica Acta-Biomembranes 1798 (11), pp. 2114 - 2123 (2010)
52.
Journal Article
Buschmann, S.; Warkentin, E.; Xie, H.; Langer, J. D.; Ermler, U.; Michel, H.: The Structure of cbb3 Cytochrome Oxidase Provides Insights into Proton Pumping. Science 329 (5989), pp. 327 - 330 (2010)
53.
Journal Article
Langer, J. D.; Roth, C. M.; Béthune, J.; Stoops, E. H.; Brügger, B.; Herten, D.-P.; Wieland, F. T.: A Conformational Change in the α‐subunit of Coatomer Induced by Ligand Binding to γ‐COP Revealed by Single‐pair FRET. Traffic 9 (4), pp. 597 - 607 (2008)
54.
Journal Article
Langer, J. D.; Stoops, E. H.; Béthune, J.; Wieland, F. T.: Conformational changes of coat proteins during vesicle formation. FEBS Letters 581 (11), pp. 2083 - 2088 (2007)

Proceedings (2)

55.
Proceedings
Structural basis for energy transduction by respiratory alternative complex III (Biochim. Biophys. Acta (BBA) - Bioenergetics, 1859). 20th European Bioenergetics Conference, Budapest, August 25, 2018 - August 30, 2018. (2018)
56.
Proceedings
Cryo-EM structure of the alternative complex III from Rhodothermus marinus (Biochim. Biophys. Acta (BBA) - Bioenergetics, 1859). (2018), 1 p.
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