A Journey into the Enigmatic Mitochondrion

1.

Journal Article

Fuchs, J.; Fernández-Arévalo, U.; Demmer, U.; Díaz, E.; Ullmann, G. M.; Pierik, A. J.; Ermler, U.; Boll, M.: Enzymatic Birch reduction via hydrogen atom transfer at [4Fe-4S]-OH₂ and [8Fe-9S] clusters. Nature Communications 16, 3236 (2025)

MPG.PuRe

DOI

Full

2.

Journal Article

Joshi, T.; Demmer, U.; Schneider, C.; Glaser, T.; Warkentin, E.; Ermler, U.; Mack, M.: The phosphatase RosC from Streptomyces davaonensis is used for roseoflavin biosynthesis and has evolved to largely prevent dephosphorylation of the important cofactor riboflavin-5'-phosphate. Journal of Molecular Biology 436 (20), 168734 (2024)

MPG.PuRe

DOI

Full

3.

Journal Article

Gehl, M.; Demmer, U.; Ermler, U.; Shima, S.: Mutational and structural studies of (βα)₈-barrel fold methylene-tetrahydropterin reductases utilizing a common catalytic mechanism. Protein Science 33 (6), e5018 (2024)

MPG.PuRe

DOI

Full

4.

Journal Article

Aziz, I.; Kayastha, K.; Kaltwasser, S.; Vonck, J.; Welsch, S.; Murphy, B. J.; Kahnt, J.; Wu, D.; Wagner, T.; Shima, S. et al.; Ermler, U.: Structural and mechanistic basis of the central energy-converting methyltransferase complex of methanogenesis. PNAS 121 (14), e2315568121 (2024)

MPG.PuRe

DOI

5.

Journal Article

Demmer, U.; Lemaire, O.; Belhamri, M.; Ermler, U.: Ethoxylate Polymer-Based 96-Well Screen for Protein Crystallization. Crystals 13, 1519 (2023)

MPG.PuRe

DOI

Full

6.

Journal Article

Gehl, M.; Demmer, U.; Ermler, U.; Shima, S.: Crystal structure of FAD-independent methylene-tetrahydrofolate reductase from Mycobacterium hassiacum. Proteins: Structure, Function, and Bioinformatics 91 (9), pp. 1329 - 1340 (2023)

MPG.PuRe

DOI

Full

7.

Journal Article

Vitt, S.; Prinz, S.; Eisinger, M. L.; Ermler, U.; Buckel, W.: Purification and structural characterization of the Na⁺-translocating ferredoxin: NAD⁺ reductase (Rnf) complex of Clostridium tetanomorphum. Nature Communications 13, 6315 (2022)

MPG.PuRe

DOI

Full

8.

Journal Article

Khera, R.; Mehdipour, A. R.; Bolla, J. R.; Kahnt, J.; Welsch, S.; Ermler, U.; Münke, C.; Robinson, C. V.; Hummer, G.; Xie, H. et al.; Michel, H.: Cryo-EM structures of pentameric autoinducer-2 exporter from Escherichia coli reveal its transport mechanism. The EMBO Journal 41 (18), e109990 (2022)

MPG.PuRe

DOI

Full

9.

Journal Article

Kayastha, K.; Katsyv, A.; Himmrich, C.; Welsch, S.; Schuller, J. M.; Ermler, U.; Müller, V.: Structure-based electron-confurcation mechanism of the Ldh-EtfAB complex. eLife 11, e77095 (2022)

MPG.PuRe

DOI

10.

Journal Article

Aziz, I.; Kaltwasser, S.; Kayastha, K.; Khera, R.; Vonck, J.; Ermler, U.: The molybdenum storage protein forms and deposits distinct polynuclear tungsten oxygen aggregates. Journal of Inorganic Biochemistry 234, 111904 (2022)

MPG.PuRe

DOI

11.

Journal Article

Weidenweber, S.; Schühle, K.; Lippert, M.-L.; Mock, J.; Seubert, A.; Demmer, U.; Ermler, U.; Heider, J.: Finis tolueni: a new type of thiolase with an integrated Zn-finger subunit catalyses the final step of anaerobic toluene metabolism. The FEBS Journal 5, 166 (2022)

MPG.PuRe

DOI

12.

Journal Article

Konia, E.; Chatzicharalampous, K.; Drakonaki, A.; Münke, C.; Ermler, U.; Tsiotis, G.; Pavlidis, I. V.: Rational engineering of Luminiphilus syltensis ( R)-selective amine transaminase for the acceptance of bulky substrates. Chemical Communications 57 (96), pp. 12948 - 12951 (2021)

MPG.PuRe

DOI

13.

Journal Article

Kung, J.; Meier, A.-K.; Willistein, M.; Weidenweber, S.; Demmer, U.; Ermler, U.; Boll, M.: Structural basis of cyclic 1,3-diene forming acyl-coenzyme A dehydrogenases. Chembiochem 22 (22), pp. 3172 - 3177 (2021)

MPG.PuRe

DOI

14.

Journal Article

Zhao, J.; Xie, H.; Mehdipour, A. R.; Safarian, S.; Ermler, U.; Münke, C.; Thielmann, Y.; Hummer, G.; Ebersberger, I.; Wang, J. et al.; Michel, H.: The structure of the Aquifex aeolicus MATE family multidrug resistance transporter and sequence comparisons suggest the existence of a new subfamily. Proceedings of the National Academy of Sciences of the United States of America 118 (46), e2107335118 (2021)

MPG.PuRe

DOI

15.

Journal Article

Kayastha, K.; Vitt, S.; Buckel, W.; Ermler, U.: Flavins in the electron bifurcation process. Archives of Biochemistry and Biophysics 701, 108796 (2021)

MPG.PuRe

DOI

16.

Journal Article

Appel, L.; Willistein, M.; Dahl, C.; Ermler, U.; Boll, M.: Functional diversity of prokaryotic HdrA(BC) modules: Role in flavin-based electron bifurcation processes and beyond. Biochimica et Biophysica Acta, Bioenergetics 1862 (4), 148379 (2021)

MPG.PuRe

DOI

17.

Journal Article

Ernst, C.; Kayastha, K.; Koch , T.; Venceslau, S. S.; Pereira, I. A.C.; Demmer, U.; Ermler, U.; Dahl, C.: Structural and spectroscopic characterization of a HdrA‐like subunit from Hyphomicrobium denitrificans. The FEBS Journal 288 (5), pp. 1664 - 1678 (2021)

MPG.PuRe

DOI

18.

Journal Article

Shima, S.; Huang, G.; Wagner, T.; Ermler, U.: Structural Basis of Hydrogenotrophic Methanogenesis. Annual Review of Microbiology 74, pp. 713 - 733 (2020)

MPG.PuRe

DOI

19.

Journal Article

Vitt, S.; Prinz, S.; Hellwig, N.; Morgner, N.; Ermler, U.; Buckel, W.: Molecular and Low-Resolution Structural Characterization of the Na+-Translocating Glutaconyl-CoA Decarboxylase From Clostridium symbiosum. Frontiers in Microbiology 11, 480 (2020)

MPG.PuRe

DOI

20.

Journal Article

Huang, G.; Wagner, T.; Demmer, U.; Warkentin, E.; Ermler, U.; Shima, S.: The Hydride Transfer Process in NADP-dependent Methylene-tetrahydromethanopterin Dehydrogenase. Journal of Molecular Biology (London) 432 (7), pp. 2042 - 2054 (2020)

MPG.PuRe

DOI

21.

Journal Article

Huang, G.; Wagner, T.; Ermler, U.; Shima, S.: Methanogenesis involves direct hydride transfer from H₂ to an organic substrate. Nature Reviews Chemistry 4 (2), pp. 213 - 221 (2020)

MPG.PuRe

DOI

22.

Journal Article

Brünle, S.; Eisinger, M. L.; Poppe, J.; Mills, D. J.; Langer, J. D.; Vonck, J.; Ermler, U.: Molybdate pumping into the molybdenum storage protein via an ATP-powered piercing mechanism. Proceedings of the National Academy of Sciences of the United States of America 52 (116), pp. 26497 - 26504 (2019)

MPG.PuRe

DOI

23.

Journal Article

Huang, G.; Wagner, T.; Wodrich, M. D.; Ataka, K.; Bill, E.; Ermler, U.; Hu, X.; Shima, S.: The atomic-resolution crystal structure of activated [Fe]-hydrogenase. Nature Catalysis 2 (6), pp. 537 - 543 (2019)

MPG.PuRe

DOI

24.

Journal Article

Willistein, M.; Bechtel, D. F.; Müller, C. S.; Demmer, U.; Heimann, L.; Kayastha, K.; Schünemann, V.; Pierik, A. J.; Ullmann, G. M.; Ermler, U. et al.; Boll, M.: Low potential enzymatic hydride transfer via highly cooperative and inversely functionalized flavin cofactorsLow potential enzymatic hydride transfer via highly cooperative and inversely functionalized flavin cofactors. Nature Communications 10, 2074 (2019)

MPG.PuRe

DOI

25.

Journal Article

Watanabe, T.; Wagner, T.; Huang, G.; Kahnt, J.; Ataka, K.; Ermler, U.; Shima, S.: The Bacterial [Fe]‐Hydrogenase Paralog HmdII Uses Tetrahydrofolate Derivatives as Substrates. Angewandte Chemie International Edition in English 58 (11), pp. 3506 - 3510 (2019)

MPG.PuRe

DOI

26.

Journal Article

Poppe, J.; Brünle, S.; Hail, R.; Wiesemann, K.; Schneider, K.; Ermler, U.: The Molybdenum Storage Protein: A soluble ATP hydrolysis‐dependent molybdate pump. The FEBS Journal 285 (24), pp. 4602 - 4616 (2018)

MPG.PuRe

DOI

27.

Journal Article

Brünle, S.; Poppe, J.; Hail, R.; Demmer, U.; Ermler, U.: The molybdenum storage protein - A bionanolab for creating experimentally alterable polyoxomolybdate clusters. Journal of Inorganic Biochemistry 189 (12), pp. 172 - 179 (2018)

MPG.PuRe

DOI

28.

Journal Article

Wagner , T.; Huang, G.; Ermler, U.; Shima, S.: How [Fe]-Hydrogenase from Methanothermobacter is Protected Against Light and Oxidative Stress. Angewandte Chemie International Edition in English 57 (46), pp. 15056 - 15059 (2018)

MPG.PuRe

DOI

29.

Journal Article

Huang, G.; Wagner, T.; Ermler, U.; Bill, E.; Ataka, K.; Shima, S.: Dioxygen Sensitivity of [Fe]‐Hydrogenase in the Presence of Reducing Substrates. Angewandte Chemie International Edition in English 57 (18), pp. 4917 - 4920 (2018)

MPG.PuRe

DOI

30.

Journal Article

Demmer, J. K.; Bertsch, J.; Öppinger, C.; Wohlers, H.; Kayastha, K.; Demmer, U.; Ermler, U.; Müller, V.: Molecular basis of the flavin‐based electron‐bifurcating caffeyl‐CoA reductase reaction. FEBS Letters 592 (3), pp. 332 - 342 (2018)

MPG.PuRe

DOI

31.

Journal Article

Demmer, J. K.; Chowdhury, N. P.; Selmer, T.; Ermler, U.; Buckel, W.: The semiquinone swing in the bifurcating electron transferring flavoprotein/butyryl-CoA dehydrogenase complex from Clostridium difficile. Nature Communications 8, 1577 (2017)

MPG.PuRe

DOI

32.

Journal Article

Warkentin, E.; Weidenweber, S.; Schühle, K.; Demmer, U.; Heider, J.; Ermler, U.: A rare polyglycine type II-like helix motif in naturally occurring proteins. Proteins: Structure, Function, and Bioinformatics 85 (11), pp. 2017 - 2023 (2017)

MPG.PuRe

DOI

33.

Journal Article

Weinert, T.; Olieric, N.; Cheng, R.; Brünle, S.; James, D.; Ozerov, D.; Gashi, D.; Vera, L.; Marsh, M.; Jaeger, K. et al.; Dworkowski, F.; Panepucci, E.; Basu, S.; Skopintsev, P.; Dorè, A. S.; Geng, T.; Cooke, R. M.; Liang, M.; Prota, A. E.; Paneels, V.; Nogly, P.; Ermler, U.; Schertler, G.; Hennig, M.; Steinmetz, M. O.; Wang, M.; Standfuss, J.: Serial millisecond crystallography for routine room-temperature structure determination at synchrotrons. Nature Communications 8, 542 (2017)

MPG.PuRe

DOI

34.

Journal Article

Bai, L.; Wagner, T.; Xu, T.; Hu, X.; Ermler, U.; Shima, S.: A Water-Bridged H-Bonding Network Contributes to the Catalysis of the SAM-Dependent C-Methyltransferase HcgC. Angewandte Chemie, International Edition in English 56 (36), pp. 10806 - 10809 (2017)

MPG.PuRe

DOI

35.

Journal Article

Wagner, T.; Koch, J.; Ermler, U.; Shima, S.: Methanogenic heterodisulfide reductase (HdrABC-MvhAGD) uses two noncubane [4Fe-4S] clusters for reduction. Science 357 (6352), pp. 699 - 703 (2017)

MPG.PuRe

DOI

36.

Journal Article

Bai, L.; Fujishiro, T.; Huang, G.; Koch , J.; Takabayashi, A.; Yokono , M.; Tanaka , A.; Xu, T.; Hu , X.; Ermler, U. et al.; Shima , S.: Towards artificial methanogenesis: biosynthesis of the [Fe]-hydrogenase cofactor and characterization of the semi-synthetic hydrogenase. Faraday Discussions 198 (37), pp. 37 - 58 (2017)

MPG.PuRe

DOI

37.

Journal Article

Konjik, V.; Brünle, S.; Demmer, U.; Vanselow, A.; Sandhoff, R.; Ermler, U.; Mack, M.: The Crystal Structure of RosB: Insights into the Reaction Mechanism of the First Member of a Family of Flavodoxin-like Enzymes. Angewandte Chemie, International Edition in English 56 (4), pp. 1146 - 1151 (2017)

MPG.PuRe

DOI

38.

Journal Article

Weidenweber, S.; Schühle, K.; Demmer, U.; Warkentin, E.; Ermler, U.; Heider, J.: Structure of the acetophenone carboxylase core complex: prototype of a new class of ATP-dependent carboxylases/hydrolases. Scientific Reports 7, 39674 (2017)

MPG.PuRe

DOI

39.

Journal Article

Demmer, J. K.; Rupprecht, F. A.; Eisinger, M. L.; Ermler, U.; Langer, J. D.: Ligand binding and conformational dynamics in a flavin-based electron-bifurcating enzyme complex revealed by Hydrogen-Deuterium Exchange Mass Spectrometry. FEBS Letters 590 (24), pp. 4472 - 4479 (2016)

MPG.PuRe

DOI

40.

Journal Article

Wagner , T.; Ermler, U.; Shima, S.: The methanogenic CO₂ reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters. Science Magazine 354 (6308), pp. 114 - 117 (2016)

MPG.PuRe

DOI

41.

Journal Article

Upadhyay, V.; Ceh, K.; Tumulka, F.; Abele, R.; Hoffmann , J.; Langer, J. D.; Shima, S.; Ermler, U.: Molecular characterization of methanogenic N⁵-methyltetrahydromethanopterin: Coenzyme M methyltransferase. Biochimica et Biophysica Acta-Biomembranes 1858 (9), pp. 2140 - 2144 (2016)

MPG.PuRe

DOI

42.

Journal Article

Wagner, T.; Kahnt, J.; Ermler, U.; Shima, S.: Didehydroaspartate Modification in Methyl-Coenzyme M Reductase Catalyzing Methane Formation. Angewandte Chemie International Edition in English 55 (36), pp. 10630 - 10633 (2016)

MPG.PuRe

DOI

43.

Journal Article

Fujishiro, T.; Bai , L.; Xu , T.; Xie , X.; Schick, M.; Kahnt, J.; Rother, M.; Hu , X.; Ermler, U.; Shima, S.: Identification of HcgC as a SAM-Dependent Pyridinol Methyltransferase in [Fe]-Hydrogenase Cofactor Biosynthesis. Angewandte Chemie International Edition in English 55 (33), pp. 9648 - 9651 (2016)

MPG.PuRe

DOI

44.

Journal Article

Wagner, T.; Ermler, U.; Shima, S.: MtrA of the sodium ion pumping methyltransferase binds cobalamin in a unique mode. Scientific Reports 6, 28226 (2016)

MPG.PuRe

DOI

45.

Journal Article

Weidenweber, S.; Marmulla, R.; Ermler, U.; Harder, J.: X-ray structure of linalool dehydratase/isomerase from Castellaniella defragrans reveals enzymatic alkene synthesis. FEBS Letters 590 (9), pp. 1375 - 1383 (2016)

MPG.PuRe

DOI

46.

Journal Article

Boll, M.; Einsle, O.; Ermler, U.; Kroneck, P. M.H.: Structure and Function of the Unusual Tungsten Enzymes Acetylene Hydratase and Class II Benzoyl-Coenzyme A Reductase. Journal of Molecular Microbiology and Biotechnology 26 (1-3), pp. 119 - 137 (2016)

MPG.PuRe

DOI

47.

Journal Article

Boll, M.; Kung, J. W.; Ermler, U.; Martins, B. M.; Buckel, W.: Fermentative Cyclohexane Carboxylate Formation in Syntrophus aciditrophicus. Journal of Molecular Microbiology and Biotechnology 26 (1-3), pp. 165 - 179 (2016)

MPG.PuRe

DOI

48.

Journal Article

Rabus, R.; Boll , M.; Heider, J.; Meckenstock, R. U.; Buckel, W.; Einsle, O.; Ermler, U.; Golding, B. T.; Gunsalus, R. P.; Kroneck, P. M.H. et al.; Krüger, M.; Lueders, T.; Martins, B. M.; Musat, F.; Richnow, H. H.; Schink, B.; Seifert, J.; Szaleniec, M.; Treude, T.; Ullmann, G. M.; Vogt, C.; von Bergen, M.; Wilkes, H.: Anaerobic Microbial Degradation of Hydrocarbons: From Enzymatic Reactions to the Environment. Journal of Molecular Microbiology and Biotechnology 26 (1-3), pp. 5 - 28 (2016)

MPG.PuRe

DOI

49.

Journal Article

Demmer, J. K.; Huang, H.; Wang, S.; Demmer, U.; Thauer, R. K.; Ermler, U.: Insights into Flavin-based Electron Bifurcation via the NADH-dependent Reduced Ferredoxin:NADP Oxidoreductase Structure. The Journal of Biological Chemistry 290 (36), pp. 21985 - 21885 (2015)

MPG.PuRe

DOI

50.

Journal Article

Fujishiro, T.; Ataka, K.; Ermler, U.; Shima, S.: Towards a functional identification of catalytically inactive [Fe]-hydrogenase paralogs. FEBS Journal 282 (17), pp. 3412 - 3423 (2015)

MPG.PuRe

DOI

51.

Journal Article

Weinert, T.; Huwiler, S.; Kung, J. W.; Weidenweber, S.; Hellwig, P.; Stärk, H.-J.; Biskup, T.; Weber, S.; Cotelesage, J. J.H.; George, G. N. et al.; Ermler, U.; Boll, M.: Structural basis of enzymatic benzene ring reduction. Nature Chemical Biology 11 (8), pp. 586 - 591 (2015)

MPG.PuRe

DOI

52.

Journal Article

Fujishiro, T.; Kahnt, J.; Ermler, U.; Shima, S.: Protein-pyridinol thioester precursor for biosynthesis of the organometallic acyl-iron ligand in [Fe]-hydrogenase cofactor. Nature Communications 6, e6895 (2015)

MPG.PuRe

DOI

53.

Journal Article

Rekittke, I.; Warkentin, E.; Jomaa, H.; Ermler, U.: Structure of the GcpE-HMBPP complex from Thermus thermophilius. Biochemical and Biophysical Research Communications 458 (2), pp. 246 - 250 (2015)

MPG.PuRe

DOI

54.

Journal Article

Poppe, J.; Warkentin, E.; Demmer, U.; Kowalewski, B.; Dierks, T.; Schneider, K.; Ermler, U.: Structural diversity of polyoxomolybdate clusters along the three-fold axis of the molybdenum storage protein. Journal of Inorganic Biochemistry 138, pp. 122 - 128 (2014)

MPG.PuRe

DOI

55.

Journal Article

Fujishiro, T.; Ermler, U.; Shima, S.: A possible iron delivery function of the dinuclear iron center of HcgD in [Fe]-hydrogenase cofactor biosynthesis. FEBS Letters 588 (17), pp. 2789 - 2793 (2014)

MPG.PuRe

DOI

56.

Journal Article

Vitt, S.; Ma, K.; Warkentin, E.; Moll, J.; Pierik, A. J.; Shima, S.; Ermler, U.: The F₄₂₀-Reducing [NiFe]-Hydrogenase Complex from Methanothermobacter marburgensis, the First X-ray Structure of a Group 3 Family Member. Journal of Molecular Biology (London) 426 (15), pp. 2813 - 2826 (2014)

MPG.PuRe

DOI

57.

Journal Article

Buschmann, S.; Richers, S.; Ermler, U.; Michel, H.: A decade of crystallization drops: Crystallization of the cbb₃ cytochrome c oxidase from Pseudomonas stutzeri. Protein Science 23 (4), pp. 411 - 422 (2014)

MPG.PuRe

DOI

58.

Journal Article

Chowdhury, N. P.; Mowafy, A. M.; Demmer, J. K.; Upadhyay, V.; Koelzer, S.; Jayamani, E.; Kahnt, J.; Hornung, M.; Demmer, U.; Ermler, U. et al.; Buckel, W.: Studies on the Mechanism of Electron Bifurcation Catalyzed by Electron Transferring Flavoprotein (Etf) and Butyryl-CoA Dehydrogenase (Bcd) of Acidaminococcus fermentans. The Journal of Biological Chemistry 289 (8), pp. 5145 - 5157 (2014)

MPG.PuRe

DOI

59.

Journal Article

Rekittke, I.; Olkhova, E.; Wiesner, J.; Demmer, U.; Warkentin, E.; Jomaa, H.; Ermler, U.: Structure of the (E)-4-hydroxy-3-methyl-but-2-enyl-diphosphate reductase from Plasmodium falciparum. FEBS Letters 587 (24), pp. 3968 - 3972 (2013)

MPG.PuRe

DOI

60.

Journal Article

Fielding, A. J.; Parey, K.; Ermler, U.; Scheller, S.; Jaun, B.; Bennati, M.: Advanced electron paramagnetic resonance on the catalytic iron–sulfur cluster bound to the CCG domain of heterodisulfide reductase and succinate: quinone reductase. Journal of Biological Inorganic Chemistry 18 (8), pp. 905 - 915 (2013)

MPG.PuRe

DOI

61.

Journal Article

Fujishiro, T.; Tamura, H.; Schick, M.; Kahnt, J.; Xie, X.; Ermler, U.; Shima, S.: Identification of the HcgB Enzyme in [Fe]-Hydrogenase-Cofactor Biosynthesis. Angewandte Chemie, International Edition in English 52 (48), pp. 12555 - 12558 (2013)

MPG.PuRe

DOI

62.

Journal Article

Parey, K.; Demmer, U.; Warkentin, E.; Wynen, A.; Ermler, U.; Dahl, C.: Structural, Biochemical and Genetic Characterization of Dissimilatory ATP Sulfurylase from Allochromatium vinosum. PLoS One 8 (9), p. e74707 - e74707 (2013)

MPG.PuRe

DOI

63.

Journal Article

Tamura, H.; Salomone-Stagni, M.; Fujishiro, T.; Warkentin, E.; Meyer-Klaucke, W.; Ermler, U.; shima, S.: Crystal Structures of [Fe]-Hydrogenase in Complex with Inhibitory Isocyanides: Implications for the H₂-Activation Site. Angewandte Chemie, International Edition in English 52 (37), pp. 9656 - 9659 (2013)

MPG.PuRe

DOI

64.

Journal Article

Parey, K.; Fritz, G.; Ermler, U.; Kroneck, P. M. H.: Conserving energy with sulfate around 100 °C - structure and mechanism of key metal enzymes in hyperthermophilic Archaeoglobus fulgidus. Metallomics 5 (4), pp. 302 - 317 (2013)

MPG.PuRe

DOI

65.

Journal Article

Demmer, U.; Warkentin, E.; Srivastava, A.; Kockelkorn, D.; Pötter, M.; Marx, A.; Fuchs, G.; Ermler, U.: Structural Basis for a Bispecific NADP⁺ and CoA Binding Site in an Archaeal Malonyl-Coenzyme A Reductase. The Journal of Biological Chemistry 288 (9), pp. 6363 - 6370 (2013)

MPG.PuRe

DOI

66.

Journal Article

El Hammi, E.; Warkentin, E.; Demmer, U.; Marzouki, N. M.; Ermler, U.; Baciou, L.: Active site analysis of yeast flavohemoglobin based on its structure with a small ligand or econazole. The FEBS Journal 279 (24), pp. 4565 - 4575 (2012)

MPG.PuRe

DOI

67.

Journal Article

Upadhyay, V.; Demmer, U.; Warkentin, E.; Moll, J.; Shima, S.; Ermler, U.: Structure and Catalytic Mechanism of N⁵,N¹⁰-Methenyltetrahydromethanopterin Cyclohydrolase. Biochemistry 51 (42), pp. 8435 - 8443 (2012)

MPG.PuRe

DOI

68.

Journal Article

Rekittke, I.; Jomaa, H. H.; Ermler, U.: Structure of the GcpE (IspG)-MEcPP complex from Thermus thermophilus. FEBS Letters 586 (19), pp. 3452 - 3457 (2012)

MPG.PuRe

DOI

69.

Journal Article

Shima, S.; Ermler, U.: Crystal structure and biochemistry of methyl-coenzyme M reductase from Black Sea mats mediating anaerobic oxidation of methane. Biseibutsu Seitai 27 (2), pp. 55 - 62 (2012)

MPG.PuRe

DOI

70.

Journal Article

Kowalewski, B.; Poppe, J.; Demmer, U.; Warkentin, E.; Dierks, T.; Ermler, U.; Schneider, K.: Nature’s Polyoxometalate Chemistry: X-ray Structure of the Mo Storage Protein Loaded with Discrete Polynuclear Mo−O Clusters. The Journal of Physical Chemistry A 134 (23), pp. 9768 - 9774 (2012)

MPG.PuRe

DOI

71.

Journal Article

Steinbach, A.; Fraas, S.; Harder, J.; Warkentin, E.; Kroneck, P. M. H.; Ermler, U.: Crystal structure of a ring-cleaving cyclohexane-1,2-dione hydrolase, a novel member of the thiamine diphosphate enzyme family. The FEBS Journal 279 (7), pp. 1209 - 1219 (2012)

MPG.PuRe

DOI

72.

Journal Article

Shima, S.; Krueger, M.; Weinert, T.; Demmer, U.; Kahnt, J.; Thauer, R. K.; Ermler, U.: Structure of a methyl-coenzyme M reductase from Black Sea mats that oxidize methane anaerobically. Nature 481 (7379), pp. 98 - 101 (2012)

MPG.PuRe

DOI

73.

Journal Article

Steinbach, A. K.; Fraas, S.; Harder, J.; Tabbert, A.; Brinkmann, H.; Meyer, A.; Ermler, U.; Kroneck, P. M. H.: Cyclohexane-1,2-Dione Hydrolase from Denitrifying Azoarcus sp. Strain 22Lin, a Novel Member of the Thiamine Diphosphate Enzyme Family. Journal of Bacteriology 193 (23), pp. 6760 - 6769 (2011)

MPG.PuRe

DOI

74.

Journal Article

Rather, L. J.; Weinert, T.; Demmer, U.; Bill, E.; Ismail, W.; Fuchs, G.; Ermler, U.: Structure and Mechanism of the Diiron Benzoyl-Coenzyme A Epoxidase BoxB. The Journal of Biological Chemistry 286 (33), pp. 29241 - 29248 (2011)

MPG.PuRe

DOI

75.

Journal Article

Shima, S.; Ermler, U.: Structure and Function of [Fe]-Hydrogenase and its Iron–Guanylylpyridinol (FeGP) Cofactor. European Journal of Inorganic Chemistry 2011 (7), pp. 963 - 972 (2011)

MPG.PuRe

DOI

76.

Journal Article

Barthelme, D.; Dinkelaker, S.; Albers, S.-V.; Londei, P.; Ermler, U.; Tampé, R.: Ribosome recycling depends on a mechanistic link between the FeS cluster domain and a conformational switch of the twin-ATPase ABCE1. Proceedings of the National Academy of Sciences of the United States of America 108 (8), pp. 3228 - 3233 (2011)

MPG.PuRe

DOI

77.

Journal Article

El Hammi, E.; Warkentin, E.; Demmer, U.; Limam, F.; Marzouki, N. M.; Ermler, U.; Baciou, L.: Structure of Ralstonia eutropha Flavohemoglobin in Complex with Three Antibiotic Azole Compounds. Biochemistry 50 (7), pp. 1255 - 1264 (2011)

MPG.PuRe

DOI

78.

Journal Article

Rekittke, I.; Nonaka, T.; Wiesner, J.; Demmer, U.; Warkentin, E.; Jomaa, H.; Ermler, U.: Structure of the E-1-hydroxy-2-methyl-but-2-enyl-4-diphosphate synthase (GcpE) from Thermus thermophilus. FEBS Letters 585 (3), pp. 447 - 451 (2011)

MPG.PuRe

DOI

79.

Journal Article

Parey, K.; Warkentin, E.; Kroneck, P. M.; Ermler, U.: Reaction Cycle of the Dissimilatory Sulfite Reductase from Archaeoglobus fulgidus. Biochemistry 49 (41), pp. 8912 - 8921 (2010)

MPG.PuRe

DOI

80.

Journal Article

Buschmann, S.; Warkentin, E.; Xie, H.; Langer, J. D.; Ermler, U.; Michel, H.: The Structure of cbb₃ Cytochrome Oxidase Provides Insights into Proton Pumping. Science 329 (5989), pp. 327 - 330 (2010)

MPG.PuRe

DOI

81.

Journal Article

Rajendran, C.; Ermler, U.; Ludwig, B.; Michel, H.: Structure at 1.5 Å resolution of cytochrome c₅₅₂ with its flexible linker segment, a membrane-anchored protein from Paracoccus denitrificans. Acta Crystallographica. Section D: Biological Crystallography (Copenhagen) D66 (7), pp. 850 - 854 (2010)

MPG.PuRe

DOI

82.

Journal Article

Wischgoll, S.; Demmer, U.; Warkentin, E.; Günther, R.; Boll, M.; Ermler, U.: Structural Basis for Promoting and Preventing Decarboxylation in Glutaryl-Coenzyme A Dehydrogenases. Biochemistry 49 (25), pp. 5350 - 5357 (2010)

MPG.PuRe

DOI

83.

Journal Article

Marcia, M.; Ermler, U.; Peng, G.; Michel, H.: A new structure-based classification of sulfide:quinone oxidoreductases. Proteins: Structure, Function, and Bioinformatics 78 (5), pp. 1073 - 1083 (2010)

MPG.PuRe

DOI

84.

Journal Article

Fraas, S.; Steinbach, A. K.; Tabbert, A.; Harder, J.; Ermler, U.; Tittmann, K.; Meyer, A.; Kroneck, P. M.H.: Cyclohexane-1,2-dione hydrolase: A new tool to degrade alicyclic compounds. Journal of Molecular Catalysis B: Enzymatic 61 (1-2), pp. 47 - 49 (2009)

MPG.PuRe

DOI

85.

Journal Article

Ceh, K.; Demmer, U.; Warkentin, E.; Moll, J.; Thauer, R. K.; Shima, S.; Ermler, U.: Structural Basis of the Hydride Transfer Mechanism in F₄₂₀-Dependent Methylenetetrahydromethanopterin Dehydrogenase. Biochemistry 49 (42), pp. 10098 - 10105 (2009)

MPG.PuRe

DOI

86.

Journal Article

Hiromoto, T.; Warkentin, E.; Moll, J.; Ermler, U.; Shima, S.: The Crystal Structure of an [Fe]-Hydrogenase-Substrate Complex Reveals the Framework for H₂ Activation. Angewandte Chemie, International Edition in English 48 (35), pp. 6457 - 6460 (2009)

MPG.PuRe

DOI

87.

Journal Article

Marcia, M.; Ermler, U.; Peng, G.; Michel, H.: The structure of Aquifex aeolicus sulfide:quinone oxidoreductase, a basis to understand sulfide detoxification and respiration. Proceedings of the National Academy of Sciences of the United States of America 106 (24), pp. 9625 - 9630 (2009)

MPG.PuRe

DOI

88.

Journal Article

Hiromoto, T.; Ataka, K.; Pilak, O.; Vogt, S.; Stagni, M. S.; Meyer-Klaucke, W.; Warkentin, E.; Thauer, R. K.; Shima, S.; Ermler, U.: The crystal structure of C176A mutated [Fe]-hydrogenase suggests an acyl-iron ligation in the active site iron complex. FEBS Letters 583 (3), pp. 585 - 590 (2009)

MPG.PuRe

DOI

89.

Journal Article

Shima, S.; Pilak, O.; Vogt, S.; Schick, , M.; Stagni, M. S.; Meyer-Klauke, W.; Warkentin, E.; Thauer, R. K.; Ermler, U.: The Crystal Structure of [Fe]-Hydrogenase Reveals the Geometry of the Active Site. Science 321 (5888), pp. 572 - 575 (2008)

MPG.PuRe

DOI

90.

Journal Article

Schiffer, A.; Parey, K.; Warkentin, E.; Diederichs, K.; Huber, H.; Stetter, K. O.; Kroneck, P. M. H.; Ermler, U.: Structure of the Dissimilatory Sulfite Reductase from the Hyperthermophilic Archaeon Archaeoglobus fulgidus. Journal of Molecular Biology (London) 379 (5), pp. 1063 - 1074 (2008)

MPG.PuRe

DOI

91.

Journal Article

Jörg, J.; Unciuleac, M.-C.; Friedrich, T.; Warkentin, E.; Ermler, U.; Boll, M.: Inhibitors of the Molybdenum Cofactor Containing 4-Hydroxybenzoyl-CoA Reductase. Biochemistry 47 (17), pp. 4964 - 4972 (2008)

MPG.PuRe

DOI

92.

Journal Article

Schemberg, J.; Schneider, K.; Demmer, U.; Warkentin, E.; Müller, A.; Ermler, U.: Towards Biological Supramolecular Chemistry: A Variety of Pocket-Templated Metal Oxide Cluster Nucleations in the Cavity of a Mo/W-Storage Protein. Angewandte Chemie, International Edition in English 46 (14), pp. 2408 - 2413 (2007)

MPG.PuRe

DOI

93.

Journal Article

Seedorf, H.; Hagemeier, C. H.; Shima, S.; Thauer, R. K.; Warkentin, E.; Ermler, U.: Structure of coenzyme F₄₂₀H₂ oxidase (FprA), a di-iron flavoprotein from methanogenic Archaea catalysing the reduction of O₂ to H₂O. The FEBS Journal 274 (6), pp. 1588 - 1599 (2007)

MPG.PuRe

DOI

94.

Journal Article

de Olivereira, P.; Ranjbari, A.; Baciou, L.; Bizouarn, T.; Ollesch, G.; Ermler, U.; Sebban, P.; Keita, B.; Nadjo, L.: Preliminary electrochemical studies of the flavohaemoprotein from Ralstonia eutropha entrapped in a film of methyl cellulose: activation of the reduction of dioxygen. Bioelectrochemistry 70 (1), pp. 185 - 191 (2007)

MPG.PuRe

DOI

95.

Journal Article

Hagemeier, C. H.; Krüer, M.; Thauer, R.; Warkentin, E.; Ermler, U.: Insight into the mechanism of biological methanol activation based on the crystal structure of the methanol-cobalamin methyltransferase complex. Proceedings of the National Academy of Sciences of the United States of America 103 (50), pp. 18917 - 18922 (2006)

MPG.PuRe

DOI

96.

Journal Article

Pilak, O.; Mamat, B.; Vogt, S.; Hagemeier, C. H.; Thauer, R. K.; Shima, S.; Vonrhein, C.; Warkentin, E.; Ermler, U.: The Crystal Structure of the Apoenzyme of the Iron-Sulphur Cluster-free Hydrogenase. Journal of Molecular Biology (London) 358 (3), pp. 798 - 809 (2006)

MPG.PuRe

DOI

97.

Journal Article

Acharya, P.; Warkentin, E.; Ermler, U.; Thauer, R. K.; Shima, S.: The structure of a Formylmethanofuran: Tetrahydromethanopterin Formyltransferase in Complex with its Coenzymes. Journal of Molecular Biology (London) 357 (3), pp. 870 - 879 (2006)

MPG.PuRe

DOI

98.

Journal Article

Schiffer, A.; Fritz, G.; Kroneck, P. M.H.; Ermler, U.: Reaction Mechanism of the Iron-Sulfur Flavoenzyme Adenosine-5 '-Phosphosulfate Reductase Based on the Structural Characterization of Different Enzymatic States. Biochemistry 45 (9), pp. 2960 - 2967 (2006)

MPG.PuRe

DOI

99.

Journal Article

Mander, G. J.; Weiss, M. S.; Hedderich, R.; Kahnt, J.; Ermler, U.; Warkentin, E.: X-ray structure of the γ-subunit of a dissimilatory sulfite reductase: Fixed and flexible C-terminal arms. FEBS Letters 579 (21), pp. 4600 - 4604 (2005)

MPG.PuRe

DOI

100.

Journal Article

Aufhammer, S. W.; Warkentin, E.; Ermler, U.; Hagemeier, C. H.; Thauer, R. K.; Shima, S.: Crystal structure of methylenetetrahydromethanopterin (Mer) in complex with coenzyme F₄₂₀: Architecture of the F₄₂₀/FMN binding site of enzymes within the nonprolyl cis-peptide containing bacterial luciferase family. Protein Science 14 (7), pp. 1840 - 1849 (2005)

MPG.PuRe

DOI

Publications of Ulrich Ermler

Journal Article (145)

Publications of Ulrich Ermler

Other Interesting Articles