
Publikationen des Max-Planck-Institutes für Biophysik
Zeitschriftenartikel (2988)
2023
Zeitschriftenartikel
A79 (Part 4) (2023)
Crystal search - feasibility study of a real-time deep learning process for crystallization well images. Acta Crystallographica Section A: Foundations and Advances
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9, eadg6689 (2023)
A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire. Science Advances
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Unwrapping NPT Simulations to Calculate Diffusion Coefficients. Journal of Chemical Theory and Computation (2023)
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380 (6647), eadf2018 (2023)
An abundance of free regulatory (19S) proteasome particles regulates neuronal synapses. Science
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“Autophagic landscapes: on the paradox of survival through self-degradation” – A science-inspired exhibition. Autophagy (2023)
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Heteromeric clusters of ubiquitinated ER-shaping proteins drive ER-phagy. Nature (2023)
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Ubiquitination regulates ER-phagy and remodelling of endoplasmic reticulum. Nature, S. 1 - 8 (2023)
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13, 8270 (2023)
Selecting optimal support grids for super-resolution cryogenic correlated light and electron microscopy. Scientific Reports
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30 (5), S. 499 - 512 (2023)
Selective killing of the human gastric pathogen Helicobacter pylori by mitochondrial respiratory complex I inhibitors. Cell Chemical Biology
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Looping the Genome with SMC Complexes. Annual Review of Biochemistry (2023)
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6, 88 (2023)
Mirror proteorhodopsins. Communications Chemistry
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Crystal structure of FAD-independent methylene-tetrahydrofolate reductase from Mycobacterium hassiacum. Proteins: Structure, Function, and Bioinformatics (2023)
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Visualizing the disordered nuclear transport machinery in situ. Nature (2023)
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3 (4), S. 334 - 345 (2023)
Machine-guided path sampling to discover mechanisms of molecular self-organization. Nature Computational Science
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10, S. 1 - 12 (2023)
Dissecting the conformational complexity and mechanism of a bacterial heme transporter. Nature Chemical Biology
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The Smc5/6 complex is a DNA loop-extruding motor. Nature (2023)
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Functional characterization of xanthorhodopsin in Salinivibrio socompensis, a novel halophile isolated from modern stromatolites. Photochemical & Photobiological Sciences (2023)
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A lysosome membrane regeneration pathway depends on TBC1D15 and autophagic lysosomal reformation proteins. Nature Cell Biology (2023)
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204, 106230 (2023)
Purification and characterization of eukaryotic ATP-dependent transporters homologously expressed in Pichia pastoris for structural studies by cryo-electron microscopy. Protein Expression and Purification
Zeitschriftenartikel
1864 (2), 148953 (2023)
Isolation of a novel heterodimeric PSII complex via strep-tagged PsbO. Biochimica et Biophysica Acta, Bioenergetics
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Anisotropic Friction in a Ligand-Protein Complex. Nano Letters (2023)
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19 (5), S. 1592 - 1601 (2023)
Optimal Bond Constraint Topology for Molecular Dynamics Simulations of Cholesterol. Journal of Chemical Theory and Computation
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120 (12), e2221712120 (2023)
In situ snapshots along a mammalian selective autophagy pathway. Proceedings of the National Academy of Sciences of the United States of America
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30 (3), S. 321 - 329 (2023)
Essential protein P116 extracts cholesterol and other indispensable lipids for Mycoplasmas. Nature Structural and Molecular Biology
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n/a, 2200138 (2023)
Insights into the sulfur metabolism of Chlorobaculum tepidum by label-free quantitative proteomics. Proteomics
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78, 102501 (2023)
Structural ensembles of disordered proteins from hierarchical chain growth and simulation. Current Opinion in Structural Biology
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379 (6630), S. 337 (2023)
Dieter Oesterhelt (1940–2022). Science
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19 (1), e1010822 (2023)
Antibody accessibility determines location of spike surface mutations in SARS-CoV-2 variants. PLoS Computational Biology
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120 (5), e2216734120 (2023)
Cryo-EM structure of the whole photosynthetic reaction center apparatus from the green sulfur bacterium Chlorobaculum tepidum. Proceedings of the National Academy of Sciences of the United States of America
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127 (4), S. 1050 - 1062 (2023)
Surface Properties of N,N-Dimethylformamide-Water Mixtures, As Seen from Computer Simulations. The Journal of Physical Chemistry B
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133, S. 96 - 106 (2023)
Nuclear envelope assembly and dynamics during development. Seminars in Cell & Developmental Biology
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The cryoEM structure of cytochrome bd from C. glutamicum provides novel insights into structural properties of actinobacterial terminal oxidases. Frontiers in Chemistry (2023)
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9, S. 142 - 156 (2023)
Cryo-EM structure of the respiratory I + III2 supercomplex from Arabidopsis thaliana at 2 Å resolution. Nature Plants
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10 (1), S. 27 - 37 (2023)
Analysis of the conformational heterogeneity of the Rieske iron–sulfur protein in complex III2 by cryo-EM. IUCrJ 2022
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13 (1), 7926 (2022)
Force-tuned avidity of spike variant-ACE2 interactions viewed on the single-molecule level. Nature Communications
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8 (50), eadd1436 (2022)
Membrane curvature sensing and stabilization by the autophagic LC3 lipidation machinery. Science Advances
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13, 7431 (2022)
Protein-Peptide Turnover Profiling reveals the order of PTM addition and removal during protein maturation. Nature Communications
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13, 7435 (2022)
Structures of the eukaryotic ribosome and its translational states in situ. Nature Communications
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82 (24), S. 4588 - 4590 (2022)
Mycobacterium tuberculosis hijacks ubiquitin to inhibit pyroptosis. Molecular Cell
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157 (20), 204802 (2022)
Complexes++: Efficient and versatile coarse-grained simulations of protein complexes and their dense solutions. The Journal of Chemical Physics
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FACS-mediated isolation of native autophagic vesicles. Autophagy (2022)
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8 (47), eadc9952 (2022)
Conformational changes in mitochondrial complex I of the thermophilic eukaryote Chaetomium thermophilum. Science Advances
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8 (46), eadd3855 (2022)
Insights into complex I assembly: Function of NDUFAF1 and a link with cardiolipin remodeling. Science Advances
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41 (7), 111670 (2022)
Long non-coding RNA PCAT19 safeguards DNA in quiescent endothelial cells by preventing uncontrolled phosphorylation of RPA2. Cell Reports: Methods
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11, e81432 (2022)
Sublytic gasdermin-D pores captured in atomistic molecular simulations. eLife
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240, S. 323 - 335 (2022)
Concluding remarks: Challenges and future developments in biological electron cryo-microscopy. Faraday Discussions
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157 (17), 174801 (2022)
TriMem: A parallelized hybrid Monte Carlo software for efficient simulations of lipid membranes. The Journal of Chemical Physics
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13, 6460 (2022)
Structural insights into light-driven anion pumping in cyanobacteria. Nature Communications
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13, 6315 (2022)
Purification and structural characterization of the Na+-translocating ferredoxin: NAD+ reductase (Rnf) complex of Clostridium tetanomorphum. Nature Communications
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29 (10), S. 1465 - 1466 (2022)
Localization matters in targeted protein degradation. Cell Chemical Biology
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RNA Captures More Cations than DNA: Insights from Molecular Dynamics Simulations. The Journal of Physical Chemistry B (2022)
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126 (43), S. 8646 - 8654 (2022)
Structural and functional investigation of ABC transporter STE6-2p from Pichia pastoris reveals unexpected interaction with sterol molecules. Proceedings of the National Academy of Sciences of the United States of America
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4, S. 537 - 543 (2022)
Electrochemical Antigenic Sensor for the Diagnosis of Chronic Q Fever. Current Research in Biotechnology
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13 (1), 6091 (2022)
Ion transfer mechanisms in Mrp-type antiporters from high resolution cryoEM and molecular dynamics simulations. Nature Communications
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Lipid and protein content profiling of isolated native autophagic vesicles. EMBO Reports, e53065 (2022)
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378 (6616), S. 155 - 160 (2022)
Evolution of increased complexity and specificity at the dawn of form I Rubiscos. Science
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119 (39), e2209823119 (2022)
In situ structural analysis reveals membrane shape transitions during autophagosome formation. Proceedings of the National Academy of Sciences of the United States of America
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20, S. 5430 - 5439 (2022)
Ligand binding and conformational dynamics of the E. coli nicotinamide nucleotide transhydrogenase revealed by hydrogen/deuterium exchange mass spectrometry. Computational and Structural Biotechnology Journal
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41 (18), e109990 (2022)
Cryo-EM structures of pentameric autoinducer-2 exporter from Escherichia coli reveal its transport mechanism. The EMBO Journal
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13, 5395 (2022)
Structure of the membrane-bound formate hydrogenlyase complex from Escherichia coli. Nature Communications
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76, S. 211 - 233 (2022)
Regulation of Host-Pathogen Interactions via the Ubiquitin System. Annual Review of Microbiology
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Nanoporous Membranes of Densely Packed Carbon Nanotubes Formed by Lipid-Mediated Self-Assembly. ACS applied bio materials (2022)
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8 (35), eabq5206 (2022)
Operation of a TCA cycle subnetwork in the mammalian nucleus. Science Advances
Zeitschriftenartikel
617, S. 36 - 41 (2022)
One of the two N-glycans on the human Gb3/CD77 synthase is essential for its activity and allosterically regulates its function. Biochemical and Biophysical Research Communications (Orlando, FL)
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13 (32), S. 7490 - 7496 (2022)
Transition Rates and Efficiency of Collective Variables from Time-Dependent Biased Simulations. The Journal of Physical Chemistry Letters
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185 (17), S. 3201 - 3213 (2022)
Structure of a fully assembled tumor-specific T cell receptor ligated by pMHC. Cell
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4 (3), 033097 (2022)
Reversible bond kinetics from single-molecule force spectroscopy experiments close to equilibrium. Physical Review Research
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75, 102428 (2022)
Cryo-EM insights into tail-anchored membrane protein biogenesis in eukaryotes. Current Opinion in Structural Biology
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157 (3), 034101 (2022)
Small ionic radii limit time step in Martini 3 molecular dynamics simulations. The Journal of Chemical Physics
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33 (7), S. 1293 - 1302 (2022)
Top-Down Identification and Sequence Analysis of Small Membrane Proteins Using MALDI-MS/MS. Journal of the American Society for Mass Spectrometry
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298 (7), 102083 (2022)
Intracellular localization of the proteasome in response to stress conditions. The Journal of Biological Chemistry
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260, 127031 (2022)
PP2ARts1 antagonizes Rck2-mediated hyperosmotic stress signaling in yeast. Microbiological Research
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5, 622 (2022)
The Vibrio vulnificus stressosome is an oxygen-sensor involved in regulating iron metabolism. Communications Biology
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5, 621 (2022)
Molecular insights into intra-complex signal transmission during stressosome activation. Communications Biology
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11, e77095 (2022)
Structure-based electron-confurcation mechanism of the Ldh-EtfAB complex. eLife
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234, 111904 (2022)
The molybdenum storage protein forms and deposits distinct polynuclear tungsten oxygen aggregates. Journal of Inorganic Biochemistry
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50 (10), S. 5726 - 5739 (2022)
Twisting DNA by salt. Nucleic Acids Research (London)
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376 (6598), eabm9506 (2022)
AI-based structure prediction empowers integrative structural analysis of human nuclear pores. Science
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82 (11), S. 2006 - 2020.e8 (2022)
Kinase domain autophosphorylation rewires the activity and substrate specificity of CK1 enzymes. Molecular Cell
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13, 3041 (2022)
Cryo-EM structures of Gid12-bound GID E3 reveal steric blockade as a mechanism inhibiting substrate ubiquitylation. Nature Communications
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13, 2708 (2022)
Ca2+-mediated higher-order assembly of heterodimers in amino acid transport system b0,+ biogenesis and cystinuria. Nature Communications
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13, 870101 (2022)
Acinetobacter baumannii Secretes a Bioactive Lipid That Triggers Inflammatory Signaling and Cell Death. Frontiers in Microbiology
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29 (5), S. 440 - 450 (2022)
True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins. Nature Structural and Molecular Biology
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13, 862851 (2022)
Multiple-Allele MHC Class II Epitope Engineering by a Molecular Dynamics-Based Evolution Protocol. Frontiers in immunology
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13 (19), S. 5734 - 5740 (2022)
Angle-dependent strength of a single chemical bond by stereographic force spectroscopy. Chemical Science
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82 (8), S. 1492 - 1500 (2022)
ER remodeling via ER-phagy. Molecular Cell
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9, 826505 (2022)
Combining Coarse-Grained Simulations and Single Molecule Analysis Reveals a Three-State Folding Model of the Guanidine-II Riboswitch. Frontiers in Molecular Biosciences
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10 (2), e01453-21 (2022)
Assembly and Functional Role of PACE Transporter PA2880 from Pseudomonas aeruginosa. Microbiology Spectrum
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13 (1), 1690 (2022)
Cyclophilin anaCyp40 regulates photosystem assembly and phycobilisome association in a cyanobacterium. Nature Communications
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156 (11), 114501 (2022)
Magnesium force fields for OPC water with accurate solvation, ion-binding, and water-exchange properties: Successful transfer from SPC/E. The Journal of Chemical Physics
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5, 166 (2022)
Finis tolueni: a new type of thiolase with an integrated Zn-finger subunit catalyses the final step of anaerobic toluene metabolism. The FEBS Journal
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3 (1), 101063 (2022)
Quantifying phosphorylation dynamics in primary neuronal cultures using LC-MS/MS. STAR Protocols
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5 (6), e202201397 (2022)
Conserved exchange of paralog proteins during neuronal differentiation. Life science alliance
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13, 1224 (2022)
Co-translational assembly orchestrates competing biogenesis pathways. Nature Communications
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82 (5), S. 886 - 888 (2022)
Bypassing the nuclear gate: A non-canonical entry pathway for the mitochondrial pyruvate dehydrogenase complex. Molecular Cell
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71 (Supplement 1), S. i30 - i50 (2022)
Forty years in cryoEM of membrane proteins. Microscopy
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29 (3), S. 218 - 228 (2022)
Structural basis of phosphatidylinositol 3-kinase C2α function. Nature Structural and Molecular Biology
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2 (3), S. 673 - 686 (2022)
Global Structure of the Intrinsically Disordered Protein Tau Emerges from Its Local Structure. JACS Au
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5 (1), 166 (2022)
An amiloride derivative is active against the F1Fo-ATP synthase and cytochrome bd oxidase of Mycobacterium tuberculosis. Communications Biology