Publikationen des Max-Planck-Institutes für Biophysik

Publikationen des Max-Planck-Institutes für Biophysik

Zeitschriftenartikel (69)

2022
Zeitschriftenartikel
Laube, E.; Meier-Credo, J.; Langer, J. D.; Kühlbrandt, W.: Conformational changes in mitochondrial complex I of the thermophilic eukaryote Chaetomium thermophilum. Science Advances 8 (47), eadc9952 (2022)
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Schmitt, D.; Bozkurt, S.; Henning-Domres, P.; Huesmann, H.; Eimer, S.; Bindila, L.; Behrends, C.; Boyle, E.; Wilfling, F.; Tascher, G. et al.; Münch, C.; Behl, C.; Kern, A.: FACS-mediated isolation of native autophagic vesicles. Autophagy (2022)
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Schiller, J.; Laube, E.; Wittig, I.; Kühlbrandt, W.; Vonck, J.; Zickermann, V.: Insights into complex I assembly: Function of NDUFAF1 and a link with cardiolipin remodeling. Science Advances 8 (46), eadd3855 (2022)
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Oo, J. A.; Pálfi, K.; Warwick, T.; Wittig, I.; Prieto-Garcia, C.; Matkovic, V.; Tomašković, I.; Boos, F.; Izquierdo Ponce, J.; Teichmann, T. et al.; Petriukov, K.; Haydar, S.; Maegdefessel, L.; Wu, Z.; Pham, M. D.; Krishnan, J.; Baker, A. H.; Günther, S.; Ulrich, H. D.; Đikić, I.; Leisegang, M. S.; Brandes, R. P.: Long non-coding RNA PCAT19 safeguards DNA in quiescent endothelial cells by preventing uncontrolled phosphorylation of RPA2. Cell Reports: Methods 41 (7), 111670 (2022)
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Schaefer, S. L.; Hummer, G.: Sublytic gasdermin-D pores captured in atomistic molecular simulations. eLife 11, e81432 (2022)
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Siggel, M.; Kehl, S.; Reuter, K.; Köfinger, J.; Hummer, G.: TriMem: A parallelized hybrid Monte Carlo software for efficient simulations of lipid membranes. The Journal of Chemical Physics 157 (17), 174801 (2022)
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Astashkin, R.; Kovalev, K.; Bukhdruker, S.; Vaganova, S.; Kuzmin, A.; Alekseev, A.; Balandin, T.; Zabelskii, D.; Gushchin, I.; Royant, A. et al.; Volkov, D.; Bourenkov, G.; Koonin, E.; Engelhard, M.; Bamberg, E.; Gordeliy, V.: Structural insights into light-driven anion pumping in cyanobacteria. Nature Communications 13, 6460 (2022)
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Kühlbrandt, W.: Concluding remarks: Challenges and future developments in biological electron cryo-microscopy. Faraday Discussions (2022)
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Vitt, S.; Prinz, S.; Eisinger, M. L.; Ermler, U.; Buckel, W.: Purification and structural characterization of the Na+-translocating ferredoxin: NAD+ reductase (Rnf) complex of Clostridium tetanomorphum. Nature Communications 13, 6315 (2022)
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Cruz-León, S.; Schwierz, N.: RNA Captures More Cations than DNA: Insights from Molecular Dynamics Simulations. The Journal of Physical Chemistry B (2022)
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Schleker, E. S. M.; Buschmann, S.; Xie, H.; Welsch, S.; Michel, H.; Reinhart, C.: Structural and functional investigation of ABC transporter STE6-2p from Pichia pastoris reveals unexpected interaction with sterol molecules. Proceedings of the National Academy of Sciences of the United States of America 119 (43), e2202822119 (2022)
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Mathioudaki, E.; Alifragis, Y.; Fouskaki, M.; Chochlakis, D.; Xie, H.; Psaroulaki, A.; Tsiotis, G.; Chaniotakis, N.: Electrochemical Antigenic Sensor for the Diagnosis of Chronic Q Fever. Current Research in Biotechnology 4, S. 537 - 543 (2022)
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Lee, Y.; Haapanen, O.; Altmeyer, A.; Kühlbrandt, W.; Sharma, V.; Zickermann, V.: Ion transfer mechanisms in Mrp-type antiporters from high resolution cryoEM and molecular dynamics simulations. Nature Communications 13 (1), 6091 (2022)
Zeitschriftenartikel
Schmitt, D.; Bozkurt, S.; Henning-Domres, P.; Huesmann, H.; Eimer, S.; Bindila, L.; Behrends, C.; Boyle, E.; Wilfling, F.; Tascher, G. et al.; Münch, C.; Behl, C.; Kern, A.: Lipid and protein content profiling of isolated native autophagic vesicles. EMBO Reports, e53065 (2022)
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Schulz, L.; Guo, Z.; Zarzycki, J.; Steinchen, W.; Schuller, J. M.; Heimerl, T.; Prinz, S.; Mueller-Cajar, O.; Erb, T. J.; Hochberg, G. K. A.: Evolution of increased complexity and specificity at the dawn of form I Rubiscos. Science 378 (6616), S. 155 - 160 (2022)
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Shah, V. J.; Đikić, I.: Localization matters in targeted protein degradation. Cell Chemical Biology 29 (10), S. 1465 - 1466 (2022)
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Zöller, J.; Hong, S.; Eisinger, M. L.; Anderson, M.; Radloff, M.; Desch, K.; Gennis, R.; Langer, J. D.: Ligand binding and conformational dynamics of the E. coli nicotinamide nucleotide transhydrogenase revealed by hydrogen/deuterium exchange mass spectrometry. Computational and Structural Biotechnology Journal 20, S. 5430 - 5439 (2022)
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Bieber, A.; Capitanio, C.; Erdmann, P. S.; Fiedler, F.; Beck, F.; Lee, C.-W.; Li, D.; Hummer, G.; Schulman, B. A.; Baumeister, W. et al.; Wilfling, F.: In situ structural analysis reveals membrane shape transitions during autophagosome formation. Proceedings of the National Academy of Sciences of the United States of America 119 (39), e2209823119 (2022)
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Khera, R.; Mehdipour, A. R.; Bolla, J. R.; Kahnt, J.; Welsch, S.; Ermler, U.; Münke, C.; Robinson, C. V.; Hummer, G.; Xie, H. et al.; Michel, H.: Cryo-EM structures of pentameric autoinducer-2 exporter from Escherichia coli reveal its transport mechanism. The EMBO Journal 41 (18), e109990 (2022)
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Steinhilper, R.; Höff, G.; Heider, J.; Murphy, B. J.: Structure of the membrane-bound formate hydrogenlyase complex from Escherichia coli. Nature Communications 13, 5395 (2022)
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Vögele, M.; Köfinger, J.; Hummer, G.: Nanoporous Membranes of Densely Packed Carbon Nanotubes Formed by Lipid-Mediated Self-Assembly. ACS applied bio materials (2022)
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Mukherjee, R.; Đikić, I.: Regulation of Host-Pathogen Interactions via the Ubiquitin System. Annual Review of Microbiology 76, S. 211 - 233 (2022)
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Kafkia, E.; Andres-Pons, A.; Ganter, K.; Seiler, M.; Smith, T. S.; Andrejeva, A.; Jouhten, P.; Pereira, F.; Franco, C.; Kuroshchenkova, A. et al.; Leone, S.; Sawarkar, R.; Boston, R.; Thaventhiran, J.; Zaugg, J. B.; Lilley, K. S.; Lancrin, C.; Beck, M.; Patil, K. R.: Operation of a TCA cycle subnetwork in the mammalian nucleus. Science Advances 8 (35), eabq5206 (2022)
Zeitschriftenartikel
Palacio-Rodriguez, K.; Vroylandt, H.; Stelzl, L. S.; Pietrucci, F.; Hummer, G.; Cossio, P.: Transition Rates and Efficiency of Collective Variables from Time-Dependent Biased Simulations. The Journal of Physical Chemistry Letters 13 (32), S. 7490 - 7496 (2022)
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Sinning, I.; McDowell, M. A.: Cryo-EM insights into tail-anchored membrane protein biogenesis in eukaryotes. Current Opinion in Structural Biology 75, 102428 (2022)
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Fábián, B.; Thallmair, S.; Hummer, G.: Small ionic radii limit time step in Martini 3 molecular dynamics simulations. The Journal of Chemical Physics 157 (3), 034101 (2022)
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Meier-Credo, J.; Preiss, L.; Wüllenweber, I.; Resemann, A.; Nordmann, C.; Zabret, J.; Suckau, D.; Michel, H.; Nowacyk, M. M.; Meier, T. et al.; Langer, J. D.: Top-Down Identification and Sequence Analysis of Small Membrane Proteins Using MALDI-MS/MS. Journal of the American Society for Mass Spectrometry 33 (7), S. 1293 - 1302 (2022)
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Enenkel, C.; Kang, R. W.; Wilfling, F.; Ernst, O. P.: Intracellular localization of the proteasome in response to stress conditions. The Journal of Biological Chemistry 298 (7), 102083 (2022)
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Hollenstein, D. M.; Veis, J.; Romanov, N.; Gérecová, G.; Ogris, E.; Hartl, M.; Ammerer, G.; Reiter, W.: PP2ARts1 antagonizes Rck2-mediated hyperosmotic stress signaling in yeast. Microbiological Research 260, 127031 (2022)
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Heinz, V.; Jäckel, W.; Kaltwasser, S.; Cutugno, L.; Bedrunka, P.; Graf, A.; Reder, A.; Michalik, S.; Dhople, V. M.; Madei, M. G. et al.; Conway, M.; Lechner, M.; Riedel, K.; Bange, G.; Boyd, A.; Völker, U.; Lewis, R. J.; Marles-Wright, J.; Ziegler, C.; Pané-Farré, J.: The Vibrio vulnificus stressosome is an oxygen-sensor involved in regulating iron metabolism. Communications Biology 5, 622 (2022)
Zeitschriftenartikel
Miksys, A.; Fu, L.; Madej, M. G.; Guerreiro, D. N.; Kaltwasser, S.; Conway, M.; Ejder, S.; Bruckmann, A.; Marles-Wright, J.; Lewis, R. J. et al.; O'Byrne, C.; Pané-Farré, J.; Ziegler, C.: Molecular insights into intra-complex signal transmission during stressosome activation. Communications Biology 5, 621 (2022)
Zeitschriftenartikel
Kayastha, K.; Katsyv, A.; Himmrich, C.; Welsch, S.; Schuller, J. M.; Ermler, U.; Müller, V.: Structure-based electron-confurcation mechanism of the Ldh-EtfAB complex. eLife 11, e77095 (2022)
Zeitschriftenartikel
Aziz, I.; Kaltwasser, S.; Kayastha, K.; Khera, R.; Vonck, J.; Ermler, U.: The molybdenum storage protein forms and deposits distinct polynuclear tungsten oxygen aggregates. Journal of Inorganic Biochemistry 234, 111904 (2022)
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Mosalaganti, S.; Obarska-Kosinska, A.; Siggel, M.; Taniguchi, R.; Turoňová, B.; Zimmerli, C. E.; Buczak, K.; Schmidt, F. H.; Margiotta, E.; Mackmull, M.-T. et al.; Hagen, W. J. H.; Hummer, G.; Kosinski, J.; Beck, M.: AI-based structure prediction empowers integrative structural analysis of human nuclear pores. Science 376 (6598), eabm9506 (2022)
Zeitschriftenartikel
Cullati, S. N.; Chaikuad, A.; Chen, J.-S.; Gebel, J.; Tesmer, L.; Zhubi, R.; Navarrete-Perea, J.; Guillen, R. X.; Gygi, S. P.; Hummer, G. et al.; Dötsch, V.; Knapp, S.; Gould, K. L.: Kinase domain autophosphorylation rewires the activity and substrate specificity of CK1 enzymes. Molecular Cell 82 (11), S. 2006 - 2020.e8 (2022)
Zeitschriftenartikel
Qiao, S.; Lee, C.-W.; Sherpa, D.; Chrustowicz, J.; Cheng, J.; Duennebacke, M.; Steigenberger, B.; Karayel, O.; Vu, D. T.; von Gronau, S. et al.; Mann, M.; Wilfling, F.; Schulman, B. A.: Cryo-EM structures of Gid12-bound GID E3 reveal steric blockade as a mechanism inhibiting substrate ubiquitylation. Nature Communications 13, 3041 (2022)
Zeitschriftenartikel
Mikolajczyk, K.; Sikora, M.; Hanus, C.; Kaczmarek, R.; Czerwinski, M.: One of the two N-glycans on the human Gb3/CD77 synthase is essential for its activity and allosterically regulates its function. Biochemical and Biophysical Research Communications (Orlando, FL) 617, S. 36 - 41 (2022)
Zeitschriftenartikel
Cruz-León, S.; Vanderlinden, W.; Müller, P.; Forster, T.; Staudt, G.; Lin, Y.-Y.; Lipfert, J.; Schwierz, N.: Twisting DNA by salt. Nucleic Acids Research (London) 50, gkac445 (2022)
Zeitschriftenartikel
Lee, Y.; Wiriyasermkul, P.; Kongpracha, P.; Moriyama, S.; Mills, D. J.; Kühlbrandt, W.; Nagamori, S.: Ca2+-mediated higher-order assembly of heterodimers in amino acid transport system b0,+ biogenesis and cystinuria. Nature Communications 13, 2708 (2022)
Zeitschriftenartikel
Tiku, V.; Kew, C.; Kofoed, E. M.; Peng, Y.; Đikić, I.; Tan, M.-W.: Acinetobacter baumannii Secretes a Bioactive Lipid That Triggers Inflammatory Signaling and Cell Death. Frontiers in Microbiology 13, 870101 (2022)
Zeitschriftenartikel
Borshchevskiy, V.; Kovalev, K.; Round, E.; Efremov, R.; Astashkin, R.; Bourenkov, G.; Bratanov, D.; Balandin, T.; Chizhov, I.; Baeken, C. et al.; Gushchin, I.; Kuzmin, A.; Alekseev, A.; Rogachev, A.; Willbold, D.; Engelhard, M.; Bamberg, E.; Büldt, G.; Gordeliy, V.: True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins. Nature Structural and Molecular Biology (2022)
Zeitschriftenartikel
Ochoa, R.; Lunardelli, V. A. S.; Rosa, D. S.; Laio, A.; Cossio, P.: Multiple-Allele MHC Class II Epitope Engineering by a Molecular Dynamics-Based Evolution Protocol l. Frontiers in immunology 13, 862851 (2022)
Zeitschriftenartikel
Cai, W.; Bullerjahn, J. T.; Lallemang, M.; Kroy, K.; Balzer, B. N.; Hugel, T.: Angle-dependent strength of a single chemical bond by stereographic force spectroscopy. Chemical Science 13 (19), S. 5734 - 5740 (2022)
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Gubas, A.; Dikic, I.: ER remodeling via ER-phagy. Molecular Cell 82 (8), S. 1492 - 1500 (2022)
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Fuks, C.; Falkner, S.; Schwierz, N.; Hengesbach, M.: Combining Coarse-Grained Simulations and Single Molecule Analysis Reveals a Three-State Folding Model of the Guanidine-II Riboswitch. Frontiers in Molecular Biosciences 9, 826505 (2022)
Zeitschriftenartikel
Zhao, J.; Hellwig, N.; Djahanschiri, B.; Khera, R.; Morgner, N.; Ebersberger, I.; Wang, J.; Michel, H.: Assembly and Functional Role of PACE Transporter PA2880 from Pseudomonas aeruginosa. Microbiology Spectrum 10 (2), e01453-21 (2022)
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Yadav, S.; Centola, M.; Glaesmann, M.; Pogoryelov, D.; Ladig, R.; Heilemann, M.; Rai, L. C.; Yildiz, Ö.; Schleiff, E.: Cyclophilin anaCyp40 regulates photosystem assembly and phycobilisome association in a cyanobacterium. Nature Communications 13 (1), 1690 (2022)
Zeitschriftenartikel
Grotz, K. K.; Schwierz, N.: Magnesium force fields for OPC water with accurate solvation, ion-binding, and water-exchange properties: Successful transfer from SPC/E. The Journal of Chemical Physics 156 (11), 114501 (2022)
Zeitschriftenartikel
Weidenweber, S.; Schühle, K.; Lippert, M.-L.; Mock, J.; Seubert, A.; Demmer, U.; Ermler, U.; Heider, J.: Finis tolueni: a new type of thiolase with an integrated Zn-finger subunit catalyses the final step of anaerobic toluene metabolism. The FEBS Journal 5, 166 (2022)
Zeitschriftenartikel
Desch, K.; Schuman, E. M.; Langer, J. D.: Quantifying phosphorylation dynamics in primary neuronal cultures using LC-MS/MS. STAR Protocols 3 (1), 101063 (2022)
Zeitschriftenartikel
Di Fraia, D.; Anitei, M.; Mackmull, M.-T.; Parca, L.; Behrendt, L.; Andres-Pons, A.; Gilmour, D.; Helmer Citterich, M.; Kaether, C.; Beck, M. et al.; Ori, A.: Conserved exchange of paralog proteins during neuronal differentiation. Life science alliance 5 (6), e202201397 (2022)
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Seidel, M.; Becker, A.; Pereira, F.; Landry, J. J. M.; de Azevedo, N. T. D.; Fusco, C. M.; Kaindl, E.; Romanov, N.; Baumbach, J.; Langer, J. D. et al.; Schuman, E. M.; Patil, K. R.; Hummer, G.; Benes, V.; Beck, M.: Co-translational assembly orchestrates competing biogenesis pathways. Nature Communications 13, 1224 (2022)
Zeitschriftenartikel
Hampoelz, B.; Baumbach, J.: Nuclear envelope assembly and dynamics during development. Seminars in Cell & Developmental Biology (2022)
Zeitschriftenartikel
Boyle, E.; Wilfling, F.: Bypassing the nuclear gate: A non-canonical entry pathway for the mitochondrial pyruvate dehydrogenase complex. Molecular Cell 82 (5), S. 886 - 888 (2022)
Zeitschriftenartikel
Kühlbrandt, W.: Forty years in cryoEM of membrane proteins. Microscopy 71 (Supplement 1), S. i30 - i50 (2022)
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Lo, W.-T.; Zhang, Y.; Vadas, O.; Roske, Y.; Gulluni, F.; De Santis, M. C.; Zagar, A. V.; Stephanowitz, H.; Hirsch, E.; Liu, F. et al.; Daumke, O.; Kudryashev, M.; Haucke, V.: Structural basis of phosphatidylinositol 3-kinase C2α function. Nature Structural and Molecular Biology 29 (3), S. 218 - 228 (2022)
Zeitschriftenartikel
Stelzl, L. S.; Pietrek, L. M.; Holla, A.; Oroz, J.; Sikora, M.; Köfinger, J.; Schuler, B.; Zweckstetter, M.; Hummer, G.: Global Structure of the Intrinsically Disordered Protein Tau Emerges from Its Local Structure. JACS Au 2 (3), S. 673 - 686 (2022)
Zeitschriftenartikel
Hards, K.; Cheung, C.-Y.; Waller, N.; Adolph, C.; Keighley, L.; Tee, Z. S.; Harold, L. K.; Menorca, A.; Bujaroski, R. S.; Buckley, B. J. et al.; Tyndall, J. D.A.; McNeil, M. B.; Rhee, K. Y.; Opel-Reading, H. K.; Krause, K.; Preiss, L.; Langer, J. D.; Meier, T.; Hasenoehrl, E. J.; Berney, M.; Kelso, M. J.; Cook, G. M.: An amiloride derivative is active against the F1Fo-ATP synthase and cytochrome bd oxidase of Mycobacterium tuberculosis. Communications Biology 5 (1), 166 (2022)
Zeitschriftenartikel
Lambert, E.; Mehdipour, A. R.; Schmidt, A.; Hummer, G.; Perez, C.: Evidence for a trap-and-flip mechanism in a proton-dependent lipid transporter. Nature Communications 13 (1), 1022 (2022)
Zeitschriftenartikel
Slováková, J.; Sikora, M.; Arslan, F. N.; Caballero-Mancebo, S.; Krens, S. F. G.; Kaufmann, W. A.; Merrin, J.; Heisenberg, C.-P.: Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion in zebrafish germ-layer progenitor cells. Proceedings of the National Academy of Sciences of the United States of America 119 (8), e2122030119 (2022)
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Neumann, J.; Schwierz, N.: Artificial Intelligence Resolves Kinetic Pathways of Magnesium Binding to RNA. Journal of Chemical Theory and Computation 18 (2), S. 1202 - 1212 (2022)
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Gruijs da Silva, L. A.; Simonetti, F.; Hutten, S.; Riemenschneider, H.; Sternburg, E. L.; Pietrek, L. M.; Gebel, J.; Dötsch, V.; Edbauer, D.; Hummer, G. et al.; Stelzl, L. S.; Dormann, D.: Disease-linked TDP-43 hyperphosphorylation suppresses TDP-43 condensation and aggregation. EMBO Journal 41 (3), e108443 (2022)
Zeitschriftenartikel
Bazzone, A.; Tesmer, L.; Kurt, D.; Kaback, H. R.; Fendler, K.; Madej, M. G.: Investigation of sugar binding kinetics of the E. coli sugar/H+ symporter XylE using solid-supported membrane-based electrophysiology. The Journal of Biological Chemistry 298 (2), 101505 (2022)
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Sanchez, C. P.; Patra, P.; Chang, S.-Y. S.; Karathanasis, C.; Hanebutte, L.; Kilian, N.; Cyrklaff, M.; Heilemann, M.; Schwarz, U. S.; Kudryashev, M. et al.; Lanzer, M.: KAHRP dynamically relocalizes to remodeled actin junctions and associates with knob spirals in P. falciparum-infected erythrocytes. Molecular Microbiology 117 (2), S. 274 - 292 (2022)
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Tyagi, A.; Ahmed, T.; Jian, S.; Bajaj, S.; Ong, S. T.; Goay, S. S. M.; Zhao, Y.; Vorobyov, I.; Tian, C.; Chandy, K. G. et al.; Bhushan, S.: Rearrangement of a unique Kv1.3 selectivity filter conformation upon binding of a drug. Proceedings of the National Academy of Sciences of the United States of America 119 (5), e2113536119 (2022)
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Ahrens, C. H.; Wade, J. T.; Champion, M. M.; Langer, J. D.: A Practical Guide to Small Protein Discovery and Characterization using Mass Spectrometry. Journal of Bacteriology 204 (1), e0035321 (2022)
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Grotz, K. K.; Schwierz, N.: Optimized Magnesium Force Field Parameters for Biomolecular Simulations with Accurate Solvation, Ion-Binding, and Water-Exchange Properties in SPC/E, TIP3P-fb, TIP4P/2005, TIP4P-Ew, and TIP4P-D. Journal of Chemical Theory and Computation 18 (1), S. 526 - 537 (2022)
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Heerde, T.; Rennegarbe, M.; Biedermann, A.; Savran, D.; Pfeiffer, P. B.; Hitzenberger, M.; Baur, J.; Puscalau-Girtu, I.; Zacharias, M.; Schwierz, N. et al.; Haupt, C.; Schmidt, M.; Fändrich, M.: Cryo-EM demonstrates the in vitro proliferation of an ex vivo amyloid fibril morphology by seeding. Nature Communications 13 (1), 85 (2022)
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Gubas, A.; Đikić, I.: A guide to the regulation of selective autophagy receptors. The FEBS Journal 289 (1), S. 75 - 89 (2022)

Buchkapitel (6)

2022
Buchkapitel
Dörrbaum , A. R.; Schuman, E. M.; Langer, J. D.: Dynamic SILAC to Determine Protein Turnover in Neurons and Glia. In: SILAC: Methods and Protocols, Bd. 2603 (Hg. Luque-Garcia, J. L.). Springer, New York, NY (2022)
Buchkapitel
Tollervey, F.; Zhang, X.; Bose, M.; Sachweh, J.; Woodruff, J. B.; Franzmann, T. M.; Mahamid, J.: Cryo-Electron Tomography of Reconstituted Biomolecular Condensates. In: Phase-Separated Biomolecular Condensates: Methods and Protocols, Bd. 2563, S. 297 - 324 (Hg. Zhou, H.-X.; Spille, J.-H.; Banerjee, P. R.). Springer, New York (2022)
Buchkapitel
Xie, H.; Münke, C.; Sommer, M.; Buschmann, S.; Michel, H.: Production of Membrane Proteins in Pseudomonas stutzeri. In: Methods in Molecular Biology, Bd. 2507, S. 91 - 110 (Hg. Mus-Veteau , I.). Humana Press, New York, NY (2022)
Buchkapitel
Alekseev, A.; Gordeliy, V.; Bamberg, E.: Rhodopsin-Based Optogenetics: Basics and Applications. In: Rhodopsin: Methods and Protocols, S. 71 - 100 (Hg. Gordeliy, V.). Springer, New York (2022)
Buchkapitel
Gordeliy, V.; Kovalev, K.; Bamberg, E.; Rodriguez-Valera, F.; Zinovev, E.; Zabelskii, D.; Alekseev, A.; Rosselli, R.; Gushchin, I.; Okhrimenko, I.: Microbial Rhodopsins. In: Rhodopsin: Methods and Protocols, S. 1 - 52 (Hg. Gordeliy, V.). Springer, New York (2022)
Buchkapitel
Ochoa, R.; Soler, M. A.; Gladich, I.; Battisti, A.; Minovski, N.; Rodriguez, A.; Fortuna, S.; Cossio, P.; Laio, A.: Computational Evolution Protocol for Peptide Design. In: Methods in Molecular Biology (MIMB), Bd. 2405, S. 335 - 359. Humana Press (2022)

Hochschulschrift - Doktorarbeit (8)

2022
Hochschulschrift - Doktorarbeit
von Bülow, S.: Molecular Simulations Towards Cell-Scale Processes. Dissertation, 197 S., Fachbereich Physik, Johann Wolfgang Goethe Universität, Frankfurt am Main (2022)
Hochschulschrift - Doktorarbeit
Klusch, N.: Structure and function of energy-converting membrane proteins. Dissertation, 270 S., Fachbereich Biowissenschaften, Johann Wolfgang Goethe-Universität, Frankfurt am Main (2022)
Hochschulschrift - Doktorarbeit
Wu, D.: Structural Insights into human SLC7-SLC3 heterodimeric amino acid transporters. Dissertation, 192 S., Fachbereich Biochemie, Chemie und Pharmazie, Johann Wolfgang Goethe Universität, Frankfurt am Main (2022)
Hochschulschrift - Doktorarbeit
Grund, T. N.: Structural and functional investigations of bd-cytochromes. Dissertation, 192 S., Fachbereich 14, Biochemie, Chemie und Pharmazie, Johann Wolfgang Goethe-Universität, Frankfurt am Main (2022)
Hochschulschrift - Doktorarbeit
Radloff, M.: Functional characterization of cytochrome bd-I oxidase from E. coli as a potential antimicrobial target. Dissertation, 117 S., Fachbereich 14, Biochemie, Chemie und Pharmazie, Johann Wolfgang Goethe-Universität Frankfurt, Frankfurt am Main (2022)
Hochschulschrift - Doktorarbeit
Kolbe, F. M.: Structural insights into the catalytic binuclear center of cytochrome c oxidase from Paracoccus denitrificans. Dissertation, 101 S., Fachbereich Biochemie, Chemie und Pharmazie, Johann Wolfgang Goethe-Universität Frankfurt, Frankfurt am Main (2022)
Hochschulschrift - Doktorarbeit
Cruz-León, S.: Metal Cations and Nucleic Acids: Accurate Force Fields and Atomistic Insights from Molecular Dynamics Simulations. Dissertation, 116 S., Fachbereich Biochemie, Chemie und Pharmazie, Johann Wolfgang Goethe Universität, Frankfurt am Main (2022)
Hochschulschrift - Doktorarbeit
Zhao, J.: Characterization of the multidrug transporters Aq_128 from Aquifex aeolicus and PA2880 from Pseudomonas aeruginosa. Dissertation, 174 S., Department of Chemical Engineering, Tianjin University, Tianjin, China (2022)

Hochschulschrift - Habilitation (1)

2022
Hochschulschrift - Habilitation
Köfinger, J.: Integration of experimental data and molecular simulations. Habilitation, 79 S., Fachbereich Physik, Johann Wolfgang Goethe-Universität Frankfurt, Frankfurt am Main (2022)

Hochschulschrift - Master (1)

2022
Hochschulschrift - Master
Sauer, K.: Deep Learning based approach for localizing and classifying particles and determining their orientations in cryo-electron tomograms with Convolutional Neural Networks and Spatial Transformer Networks. Master, 81 S., Johann Wolfgang Goethe-Universität, Frankfurt am Main (2022)
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