Publications of the Max Planck Institute of Biophysics
Institute Publications Ernst Bamberg Martin Beck Ulrich Ermler Gerhard Hummer Misha Kudryashev Werner Kühlbrandt Julian Langer Hartmut Michel Bonnie Murphy Nadine Schwierz Sonja Welsch Search YearbooksPublications Martin Beck
Journal Article (111)
1.
Journal Article
15, 4783 (2024)
Bactericidal effect of tetracycline in E. coli strain ED1a may be associated with ribosome dysfunction. Nature Communications 2.
Journal Article
15, 3992 (2024)
High-confidence 3D template matching for cryo-electron tomography. Nature Communications 3.
Journal Article
10 (17), eadk6285 (2024)
Thinner is not always better: Optimizing cryo-lamellae for subtomogram averaging. Science Advances 4.
Journal Article
187 (3), pp. 545 - 562 (2024)
Understanding the cell: Future views of structural biology. Cell 5.
Journal Article
84 (3), pp. 404 - 408 (2024)
AlphaFold: Research accelerator and hypothesis generator. Molecular Cell 6.
Journal Article
83, pp. 4318 - 4333 (2023)
Structural basis of RNA-induced autoregulation of the DExH-type RNA helicase maleless. Molecular Cell 7.
Journal Article
14, 1261180 (2023)
Preparing Arabidopsis thaliana root protoplasts for cryo electron tomography. Frontiers in Plant Science 8.
Journal Article
30, pp. 1119 - 1131 (2023)
Structure of nascent 5S RNPs at the crossroad between ribosome assembly and MDM2-p53 pathways. Nature Structural and Molecular Biology 9.
Journal Article
381 (6653), pp. 70 - 75 (2023)
Translation dynamics in human cells visualized at high resolution reveal cancer drug action. Science 10.
Journal Article
14, 3418 (2023)
Co-translational binding of importins to nascent proteins. Nature Communications 11.
Journal Article
617 (7959), pp. 162 - 169 (2023)
Visualizing the disordered nuclear transport machinery in situ. Nature 12.
Journal Article
20 (2), pp. 284 - 294 (2023)
Convolutional networks for supervised mining of molecular patterns within cellular context. Nature Methods 13.
Journal Article
11, e83299 (2022)
Glycolytic flux-signaling controls mouse embryo mesoderm development. eLife 14.
Journal Article
13, 7431 (2022)
Protein-Peptide Turnover Profiling reveals the order of PTM addition and removal during protein maturation. Nature Communications 15.
Journal Article
13, 7435 (2022)
Structures of the eukaryotic ribosome and its translational states in situ. Nature Communications 16.
Journal Article
8 (35), eabq5206 (2022)
Operation of a TCA cycle subnetwork in the mammalian nucleus. Science Advances 17.
Journal Article
376 (6598), eabm9506 (2022)
AI-based structure prediction empowers integrative structural analysis of human nuclear pores. Science 18.
Journal Article
5 (6), e202201397 (2022)
Conserved exchange of paralog proteins during neuronal differentiation. Life science alliance 19.
Journal Article
13, 1224 (2022)
Co-translational assembly orchestrates competing biogenesis pathways. Nature Communications 20.
Journal Article
10, e70506 (2021)
A modular platform for automated cryo-FIB workflows. eLife 21.
Journal Article
374 (6573), eabd9776 (2021)
Nuclear pores dilate and constrict in cellulo. Science 22.
Journal Article
374 (6568), pp. 717 - 723 (2021)
Profiling cellular diversity in sponges informs animal cell type and nervous system evolution. Science 23.
Journal Article
597 (7877), pp. 533 - 538 (2021)
Bioaccumulation of therapeutic drugs by human gut bacteria. Nature 24.
Journal Article
32 (17), pp. 1523 - 1533 (2021)
Three-dimensional superresolution fluorescence microscopy maps the variable molecular architecture of the nuclear pore complex. Molecular Biology of the Cell 25.
Journal Article
16 (7), e0254429 (2021)
Coupling proteomics and metabolomics for the unsupervised identification of protein–metabolite interactions in Chaetomium thermophilum. PLoS One 26.
Journal Article
184 (4), pp. 1032 - 1046 (2021)
Cone-shaped HIV-1 capsids are transported through intact nuclear pores. Cell 27.
Journal Article
28 (1), pp. 2 - 7 (2021)
Structural biology in the fight against COVID-19. Nature Structural and Molecular Biology 28.
Journal Article
586 (7831), pp. 796 - 800 (2020)
In-cell architecture of the nuclear pore and snapshots of its turnover. Nature 29.
Journal Article
370 (6513), pp. 203 - 208 (2020)
In situ structural analysis of SARS-CoV-2 spike reveals flexibility mediated by three hinges. Science 30.
Journal Article
117 (36), pp. 22157 - 22166 (2020)
Structural impact of K63 ubiquitin on yeast translocating ribosomes under oxidative stress. Proceedings of the National Academy of Sciences of the United States of America 31.
Journal Article
15 (9), pp. 2956 - 2979 (2020)
Spatially resolved analysis of FFPE tissue proteomes by quantitative mass spectrometry. Nature Protocols 32.
Journal Article
27 (8), pp. 743 - 751 (2020)
Cryo-EM structures of holo condensin reveal a subunit flip-flop mechanism. Nature Structural and Molecular Biology 33.
Journal Article
11, 876 (2020)
Benchmarking tomographic acquisition schemes for high-resolution structural biology. Nature Communications 34.
Journal Article
92 (5), pp. 4016 - 4022 (2020)
Proteome-Wide Structural Probing of Low-Abundant Protein Interactions by Cross-Linking Mass Spectrometry. Analytical Chemistry 35.
Journal Article
22 (2), pp. 159 - 166 (2020)
Selective autophagy degrades nuclear pore complexes. Nature Cell Biology 36.
Journal Article
21, pp. 664 - 680 (2019)
Quantitative Proteome Landscape of the NCI-60 Cancer Cell Lines. iScience 37.
Journal Article
179 (3), pp. 671 - 686.e17 (2019)
Nuclear Pores Assemble from Nucleoporin Condensates During Oogenesis. Cell 38.
Journal Article
29 (10), pp. 791 - 803 (2019)
The Benefits of Cotranslational Assembly: A Structural Perspective. Trends in Cell Biology 39.
Journal Article
177 (5), pp. 1308 - 1318 (2019)
Disentangling Genetic and Environmental Effects on the Proteotypes of Individuals. Cell 40.
Journal Article
10, 2147 (2019)
Nucleoporin Nup155 is part of the p53 network in liver cancer. Nature Communications 41.
Journal Article
48, pp. 515 - 536 (2019)
Structure and Assembly of the Nuclear Pore Complex. Annual Review of Biophysics 42.
Journal Article
8, e45284 (2019)
An ESCRT-LEM Protein Surveillance System Is Poised to Directly Monitor the Nuclear Envelope and Nuclear Transport System. eLife 43.
Journal Article
52, pp. 32 - 40 (2018)
From the resolution revolution to evolution: structural insights into the evolutionary relationships between vesicle coats and the nuclear pore. Current Opinion in Structural Biology 44.
Journal Article
8, 11249 (2018)
Nuclear Pore Complex Components in the Malaria Parasite Plasmodium Berghei. Scientific Reports 45.
Journal Article
14 (7), e8131 (2018)
Quantifying compartment-associated variations of protein abundance in proteomics data. Molecular Systems Biology 46.
Journal Article
9 (1), 2361 (2018)
In situ architecture of the algal nuclear pore complex. Nature Communications 47.
Journal Article
173 (6), pp. 1495 - 1507 (2018)
Pervasive Protein Thermal Stability Variation During the Cell Cycle. Cell 48.
Journal Article
17 (4), pp. 810 - 825 (2018)
Spatial Tissue Proteomics Quantifies Inter- And Intratumor Heterogeneity in Hepatocellular Carcinoma (HCC). Molecular and Cellular Proteomics 49.
Journal Article
9, 689 (2018)
Systematic analysis of protein turnover in primary cells. Nature Communications 50.
Journal Article
25 (1), pp. 21 - 28 (2018)
Postmitotic nuclear pore assembly proceeds by radial dilation of small membrane openings. Nature Structural and Molecular Biology 51.
Journal Article
114 (52), pp. 13726 - 13731 (2017)
Proteasomes tether to two distinct sites at the nuclear pore complex. Proceedings of the National Academy of Sciences of the United States of America 52.
Journal Article
13 (12), 962 (2017)
Landscape of nuclear transport receptor cargo specificity. Molecular Systems Biology 53.
Journal Article
67 (5), pp. 1051 - 1061 (2017)
Alterations of the nuclear transport system in hepatocellular carcinoma - New basis for therapeutic strategies. Journal of Hepatology 54.
Journal Article
8, 1107 (2017)
A Short Linear Motif in Scaffold Nup145C Connects Y-complex With Pre-Assembled Outer Ring Nup82 Complex. Nature Communications 55.
Journal Article
36 (18), pp. 2698 - 2709 (2017)
Structural Insights Into Transcription Initiation by Yeast RNA Polymerase I. The EMBO Journal 56.
Journal Article
13 (7), 936 (2017)
Capturing protein communities by structural proteomics in a thermophilic eukaryote. Molecular Systems Biology 57.
Journal Article
18 (2), pp. 73 - 89 (2017)
The nuclear pore complex: understanding its function through structural insight. Nature Reviews Molecular Cell Biology 58.
Journal Article
18 (2), pp. 264 - 279 (2017)
Architecture of the yeast Elongator complex. EMBO Journal 59.
Journal Article
215 (4), pp. 543 - 558 (2016)
The Endosomal Transcriptional Regulator RNF11 Integrates Degradation and Transport of EGFR. The Journal of Cell Biology: JCB 60.
Journal Article
7, 13248 (2016)
Structure of the ribosome post-recycling complex probed by chemical cross-linking and mass spectrometry. Nature Communications 61.
Journal Article
26 (11), pp. 825 - 837 (2016)
Cryo-Electron Tomography: Can It Reveal the Molecular Sociology of Cells in Atomic Detail? Trends in Cell Biology 62.
Journal Article
5, e19071 (2016)
Nuclear pore assembly proceeds by an inside-out extrusion of the nuclear envelope. eLife 63.
Journal Article
166 (3), pp. 664 - 678 (2016)
Pre-assembled Nuclear Pores Insert Into the Nuclear Envelope During Early Development. Cell 64.
Journal Article
23 (7), pp. 624 - 630 (2016)
Toward the atomic structure of the nuclear pore complex: when top down meets bottom up. Nature Structural and Molecular Biology 65.
Journal Article
13 (6), pp. 515 - 520 (2016)
Automated structure modeling of large protein assemblies using crosslinks as distance restraints. Nature methods 66.
Journal Article
428 (10 Pt A), pp. 2001 - 2010 (2016)
Structure Determination of the Nuclear Pore Complex With Three-Dimensional Cryo Electron Microscopy. Journal of Molecular Biology (London) 67.
Journal Article
352 (6283), pp. 363 - 365 (2016)
Molecular architecture of the inner ring scaffold of the human nuclear pore complex. Science 68.
Journal Article
17, 47 (2016)
Spatiotemporal variation of mammalian protein complex stoichiometries. Genome Biology 69.
Journal Article
11 (1), e0146457 (2016)
The Combination of X-Ray Crystallography and Cryo-Electron Microscopy Provides Insight Into the Overall Architecture of the Dodecameric Rvb1/Rvb2 Complex. PLoS One 70.
Journal Article
61 (1), pp. 125 - 137 (2016)
Influenza Polymerase Can Adopt an Alternative Configuration Involving a Radical Repacking of PB2 Domains. Molecular Cell 71.
Journal Article
7 (11), pp. 1465 - 1479 (2015)
Characterization and quantification of proteins secreted by single human embryos prior to implantation. Embo Molecular Medicine 72.
Journal Article
526 (7571), pp. 140 - 143 (2015)
In situ structural analysis of the human nuclear pore complex. Nature 73.
Journal Article
1 (3), pp. 224 - 237 (2015)
Integrated Transcriptome and Proteome Analyses Reveal Organ-Specific Proteome Deterioration in Old Rats. Cell Systems 74.
Journal Article
43 (15), pp. 7600 - 7611 (2015)
A Network of SMG-8, SMG-9 and SMG-1 C-terminal Insertion Domain Regulates UPF1 Substrate Recruitment and Phosphorylation. Nucleic Acids Research (London) 75.
Journal Article
349 (6244), pp. 195 - 198 (2015)
VESICULAR TRANSPORT. A Structure of the COPI Coat and the Role of Coat Proteins in Membrane Vesicle Assembly. Science 76.
Journal Article
6, 7387 (2015)
Architecture of TFIIIC and Its Role in RNA Polymerase III Pre-Initiation Complex Assembly. Nature Communications 77.
Journal Article
34, pp. 31 - 38 (2015)
Towards understanding nuclear pore complex architecture and dynamics in the age of integrative structural analysis. Current Opinion in Cell Biology 78.
Journal Article
14 (5), pp. 1350 - 1360 (2015)
Histone Deacetylase Inhibitors (HDACi) Cause the Selective Depletion of Bromodomain Containing Proteins (BCPs). Molecular and Cellular Proteomics 79.
Journal Article
6, 6510 (2015)
Symportin 1 Chaperones 5S RNP Assembly During Ribosome Biogenesis by Occupying an Essential rRNA-binding Site. Nature Communications 80.
Journal Article
189 (3), pp. 177 - 183 (2015)
Xlink Analyzer: software for analysis and visualization of cross-linking data in the context of three-dimensional structures. Journal of Structural Biology 81.
Journal Article
208 (3), pp. 283 - 297 (2015)
Structural basis for assembly and function of the Nup82 complex in the nuclear pore scaffold. The Journal of Cell Biology: JCB 82.
Journal Article
42 (22), pp. 13525 - 13533 (2014)
An integrated approach for genome annotation of the eukaryotic thermophile Chaetomium thermophilum. Nucleic Acids Research (London) 83.
Journal Article
74 (20), pp. 5758 - 5771 (2014)
Cellular Disposal of miR23b by RAB27-dependent Exosome Release Is Linked to Acquisition of Metastatic Properties. Cancer research: an official organ of the American Association for Cancer Research 84.
Journal Article
60 (3), pp. 884 - 895 (2014)
Prosurvival function of the cellular apoptosis susceptibility/importin-α1 transport cycle is repressed by p53 in liver cancer. Hepatology 85.
Journal Article
21 (6), pp. 560 - 568 (2014)
Association of condensin with chromosomes depends on DNA binding by its HEAT-repeat subunits. Nature Structural and Molecular Biology 86.
Journal Article
5 (2), pp. 119 - 123 (2014)
Toward understanding the structure of the vertebrate nuclear pore complex. The Nucleus 87.
Journal Article
155 (6), pp. 1233 - 1243 (2013)
Integrated structural analysis of the human nuclear pore complex scaffold. Cell 88.
Journal Article
21 (9), pp. 1672 - 1682 (2013)
Protein interfaces of the conserved Nup84 complex from Chaetomium thermophilum shown by crosslinking mass spectrometry and electron microscopy. Structure 89.
Journal Article
183 (3), pp. 363 - 367 (2013)
Fourier ring correlation as a resolution criterion for super-resolution microscopy. Journal of Structural Biology 90.
Journal Article
14 (2), pp. 178 - 183 (2013)
Facilitated aggregation of FG nucleoporins under molecular crowding conditions. EMBO Reports 91.
Journal Article
9, 648 (2013)
Cell type-specific nuclear pores: a case in point for context-dependent stoichiometry of molecular machines. Molecular Systems Biology 92.
Journal Article
337 (6100), pp. 1348 - 1352 (2012)
Structural probing of a protein phosphatase 2A network by chemical cross-linking and mass spectrometry. Science 93.
Journal Article
9 (9), pp. 901 - 903 (2012)
False discovery rate estimation for cross-linked peptides identified by mass spectrometry. Nature Methods 94.
Journal Article
178 (2), pp. 152 - 164 (2012)
High-throughput subtomogram alignment and classification by Fourier space constrained fast volumetric matching. Journal of Structural Biology 95.
Journal Article
7, 549 (2011)
The quantitative proteome of a human cell line. Molecular Systems Biology 96.
Journal Article
7, 510 (2011)
Absolute quantification of microbial proteomes at different states by directed mass spectrometry. Molecular Systems Biology 97.
Journal Article
8 (5), pp. 430 - 435 (2011)
mProphet: automated data processing and statistical validation for large-scale SRM experiments. Nature Methods 98.
Journal Article
173 (3), pp. 483 - 496 (2011)
Exploring the spatial and temporal organization of a cell's proteome. Journal of Structural Biology 99.
Journal Article
22 (1), pp. 3 - 8 (2011)
Comprehensive proteomics. Current Opinion in Biotechnology